Copertina

Phylogenomic workflow for uncultivable microbial eukaryotes using single-cell RNA sequencing - A case study with planktonic ciliates (Ciliophora, Oligotrichea).

Fuente: PubMed

Salvato in:

Dettagli Bibliografici
Autori principali:	Shazib, Shahed U A, Ahsan, Ragib, Leleu, Marie, McManus, George B, Katz, Laura A, Santoferrara, Luciana F
Natura:	Artículo científico
Lingua:	en
Pubblicazione:	Molecular phylogenetics and evolution 2025
Soggetti:	Phylogeny Ciliophora Single-Cell Analysis Sequence Analysis, RNA Transcriptome Plankton Workflow Genomics
Accesso online:	Acceder al recurso
Tags:	Aggiungi Tag Nessun Tag, puoi essere il primo ad aggiungerne!!

Documenti analoghi

Taxonomy, geographic distribution and molecular phylogeny of two freshwater Frontonia (Ciliophora, Peniculida), including a new cryptic species Frontonia paraleucas sp. nov.
di: Shi, Runzhi, et al.
Pubblicazione: (2025)

Nano3P-seq: charting the coding and noncoding transcriptome at single-molecule resolution.
di: Begik, Oguzhan, et al.
Pubblicazione: (2025)

Description of a New Telonemia Genus and Species With Novel Observations Providing Insights Into Its Hidden Diversity.
di: Mostazo-Zapata, Helena, et al.
Pubblicazione: (2025)

Regakine-1 homologue regulates leukocyte migration and activation in large yellow croaker (Larimichthys crocea).
di: Wang, Meiyan, et al.
Pubblicazione: (2025)

Evaluating Probe Design for Phylogenomics Across Taxonomic Scales: First Steps for Applying Ultraconserved Elements in an Understudied Class (Mollusca: Polyplacophora).
di: Chen, Zeyuan, et al.
Pubblicazione: (2026)

Morphology and molecular basis of cell-cell recognition in sp. nov., a phylogenetically early-emerging new species of (Ciliophora, Spirotrichea).
di: Alimenti, Claudio, et al.
Pubblicazione: (2025)

RNA-sequencing Analysis of Hybrid Females Reveals a Dominance of Expression of Alleles From Outcrossing Species Over Those From Selfing Species.
di: Shao, Yanwen, et al.
Pubblicazione: (2025)

Applications and techniques of single-cell RNA sequencing across diverse species.
di: Woo, Hyunmin, et al.
Pubblicazione: (2025)

A review of morphogenesis in hypotrichous ciliates (Ciliophora, Hypotricha): recent progress from the OUC-group.
di: Shao, Chen, et al.
Pubblicazione: (2026)

A mannitol-based buffer improves single-cell RNA sequencing of high-salt marine cells.
di: Scully, Tal D, et al.
Pubblicazione: (2025)

Morpho-molecular taxonomy and systematics of Suctoria (Ciliophora, Phyllopharyngea), with descriptions of four species from wetland habitats in China.
di: Ma, Mingzhen, et al.
Pubblicazione: (2026)

Characterization of the complete mitochondrial genomes of (von Linstow, 1892) and Zdzitowiecki, 1984 (Acanthocephala: Polymorphida), and the phylogenetic implications.
di: Xie, Y-Y, et al.
Pubblicazione: (2025)

New insights and investigation: Morphomolecular notes on the infraciliature, taxonomy, and systematics of pleurostomatid ciliates (Protozoa, Ciliophora), with establishment of a new suborder, two new genera, and three new species.
di: Zhang, Gong-Ao-Te, et al.
Pubblicazione: (2024)

Single-cell transcriptomics unveils leukocyte heterogeneity in the gills of in response to parasitic infection.
di: Li, Qiuhua, et al.
Pubblicazione: (2025)

The Morphology and Small Subunit rDNA Gene Phylogeny of the Novel Goniomonad Genus Ebisugoniomonas and Two Novel Poseidogoniomonas Species.
di: Zavadska, Daryna, et al.
Pubblicazione: (2026)

Antho-RFamide effect on light production in the bioluminescent sea pen Pennatula phosphorea (Octocorallia, Pennatulacea).
di: Duchatelet, Laurent, et al.
Pubblicazione: (2026)

Characterization of Allobodo yubaba sp. nov. and Novijibodo darinka gen. et sp. nov., cultivable free-living species of the phylogenetically enigmatic kinetoplastid taxon Allobodonidae.
di: Packer, Julia A, et al.
Pubblicazione: (2025)

On the Identity and Taxonomic Circumscription of the Pfiesteriacean Genera Aduncodinium and Speroidium (Dinophyceae).
di: Reñé, Albert, et al.
Pubblicazione: (2025)

Morphological and Molecular Phylogenetic Characterization of Three New Marine Goniomonad Species.
di: Phanprasert, Yasinee, et al.
Pubblicazione: (2025)

High-resolution spatial transcriptomics in fixed tissue using a cost-effective PCL-seq workflow.
di: Dong, Xue, et al.
Pubblicazione: (2025)

Metatranscriptomic discovery of a novel viral class from the Yangshan deep-water port virosphere.
di: Xie, Yuting, et al.
Pubblicazione: (2026)

High Grazing Rates of Marine Askenasia cf. stellaris on Mesodinium rubrum and Insights Into Its Taxonomic Status.
di: Johnson, Matthew D, et al.
Pubblicazione: (2025)

Molecular evidence for phylogenetic affinities of (Thelazioidea: Rhabdochonidae) with other spiruromorph nematodes.
di: Vainutis, K S, et al.
Pubblicazione: (2025)

To multicellularity and back again: Description of two new coccoid genera (Portococcus gen. nov. and Pseudanabaenococcus gen. nov.) in the basal "filamentous" order Pseudanabaenales, Cyanobacteria.
di: Strunecký, Otakar, et al.
Pubblicazione: (2026)

Identification and bioactivity of a programmed death-ligand 1 homologue in large yellow croaker (Larimichthys crocea).
di: Li, Qiuhua, et al.
Pubblicazione: (2025)

A Revised Understanding of Petalomonad Diversity (Petalomonadida; Euglenida) Enabled by a Cultivation Approach, With Five New Species and Two New Genera.
di: Lee, Won Je, et al.
Pubblicazione: (2026)

Phylogenomic tree of Cercozoa based on single-cell transcriptomes from 100 uncultured cells.
di: Lax, Gordon, et al.
Pubblicazione: (2026)

Diversity and Vertical Distribution of Planctomycetota in the Water Column of the Remote North Pacific.
di: Vitorino, Inês Rosado, et al.
Pubblicazione: (2025)

Characterization of prokaryotic plankton community structure in the Southern East China Sea using combined 16S-rDNA and 16S-rRNA.
di: Chang, Yi-Ting, et al.
Pubblicazione: (2025)

Microbiome characterization of the sea slugs Elysia viridis and Placida dendritica: insights into potential roles in kleptoplasty.
di: Martins, Patrícia, et al.
Pubblicazione: (2026)

Community structure and environmental drivers of coastal planktonic ciliates on the Fildes Peninsula, Antarctica.
di: Yan, Jinke, et al.
Pubblicazione: (2026)

Kapelodiniopsis flava n. g., n. sp. (Dinophyceae), a new katodinioid with haptophyte-derived plastids of multiple origins: Implications for the plastid integration process.
di: Takahashi, Kazuya, et al.
Pubblicazione: (2025)

Genetic diversity of marine copepods along the Tamil Nadu and Pondicherry, southeast coast of India.
di: Raju, Piliyan, et al.
Pubblicazione: (2026)

Identification of hot spring Obelisk-like RNA replicons and expanded diversity of the Obelisk superfamily.
di: Urayama, Syun-Ichi, et al.
Pubblicazione: (2026)

Taxonomic review of Tryblionella with special reference to the Apiculatae group-New characters of genus Tryblionella sensu stricto (Bacillariaceae).
di: Olszyński, Rafał M, et al.
Pubblicazione: (2025)

The complete mitochondrial genome of the endangered Atlantic Pygmy Devil Ray, Mobula hypostoma (Bancroft, 1831), from Brazil.
di: Bucair, Nayara, et al.
Pubblicazione: (2024)

Transcriptomic detection of Candidatus Allocryptoplasma (Anaplasmataceae) in Galápagos marine iguanas (Amblyrhynchus cristatus, Iguanidae).
di: Uesseler, Flora, et al.
Pubblicazione: (2025)

Extensive data mining uncovers novel diversity among members of the rare biosphere within the Thermoplasmatota.
di: Maeke, Mara D, et al.
Pubblicazione: (2025)

Induced pathogenicity toward open-ocean diatoms by a filterable bacterium Ekhidna algicida sp. nov.
di: Graff van Creveld, Shiri, et al.
Pubblicazione: (2026)

is the pathogen of "Baotou" disease causing serious damage to cultivation in China.
di: Pang, Tong, et al.
Pubblicazione: (2025)