First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples.
Fuente:
PubMed
Guardado en:
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
|---|---|
| Formato: | Artículo científico |
| Lenguaje: | en |
| Publicado: |
Biodiversity data journal
2025
|
| Acceso en línea: | |
| Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
| _version_ | 1868266228836990976 |
|---|---|
| author | Pavloudi, Christina Santi, Ioulia Azua, Iñigo Baña, Zuriñe Bastianini, Mauro Belser, Caroline Bilbao, Jone Bitz-Thorsen, Julie Broudin, Caroline Camusat, Mathieu Cancio, Ibon Caray-Counil, Louis Casotti, Raffaella Castel, Jade Comtet, Thierry Cox, Cymon J Daguin, Claire Díaz de Cerio, Oihane Exter, Katrina Fauvelot, Cécile Frada, Miguel J Galand, Pierre E Garczarek, Laurence González Fernández, Jose Guillou, Laure Hablützel, Pascal I Heynderickx, Hanneloor Houbin, Céline Kervella, Anne Emmanuelle Krystallas, Apostolos Lagaisse, Rune Laroquette, Arnaud Lescure, Lyvia Lopes, Eva Loulakaki, Melina Louro, Bruno Magalhaes, Catarina Maidanou, Maria Margiotta, Francesca Montresor, Marina Not, Fabrice Paredes, Estefanía Percopo, Isabella Péru, Erwan Poulain, Julie Præbel, Kim Rigaut-Jalabert, Fabienne Romac, Sarah Stavroulaki, Melanthia Souza Troncoso, Jesús Thiébaut, Eric Thomas, Wilfried Tkacz, Andrzej Trano, Anna Chiara Wincker, Patrick Pade, Nicolas |
| author_facet | Pavloudi, Christina Santi, Ioulia Azua, Iñigo Baña, Zuriñe Bastianini, Mauro Belser, Caroline Bilbao, Jone Bitz-Thorsen, Julie Broudin, Caroline Camusat, Mathieu Cancio, Ibon Caray-Counil, Louis Casotti, Raffaella Castel, Jade Comtet, Thierry Cox, Cymon J Daguin, Claire Díaz de Cerio, Oihane Exter, Katrina Fauvelot, Cécile Frada, Miguel J Galand, Pierre E Garczarek, Laurence González Fernández, Jose Guillou, Laure Hablützel, Pascal I Heynderickx, Hanneloor Houbin, Céline Kervella, Anne Emmanuelle Krystallas, Apostolos Lagaisse, Rune Laroquette, Arnaud Lescure, Lyvia Lopes, Eva Loulakaki, Melina Louro, Bruno Magalhaes, Catarina Maidanou, Maria Margiotta, Francesca Montresor, Marina Not, Fabrice Paredes, Estefanía Percopo, Isabella Péru, Erwan Poulain, Julie Præbel, Kim Rigaut-Jalabert, Fabienne Romac, Sarah Stavroulaki, Melanthia Souza Troncoso, Jesús Thiébaut, Eric Thomas, Wilfried Tkacz, Andrzej Trano, Anna Chiara Wincker, Patrick Pade, Nicolas Pavloudi, Christina Santi, Ioulia Azua, Iñigo Baña, Zuriñe Bastianini, Mauro Belser, Caroline Bilbao, Jone Bitz-Thorsen, Julie Broudin, Caroline Camusat, Mathieu Cancio, Ibon Caray-Counil, Louis Casotti, Raffaella Castel, Jade Comtet, Thierry Cox, Cymon J Daguin, Claire Díaz de Cerio, Oihane Exter, Katrina Fauvelot, Cécile Frada, Miguel J Galand, Pierre E Garczarek, Laurence González Fernández, Jose Guillou, Laure Hablützel, Pascal I Heynderickx, Hanneloor Houbin, Céline Kervella, Anne Emmanuelle Krystallas, Apostolos Lagaisse, Rune Laroquette, Arnaud Lescure, Lyvia Lopes, Eva Loulakaki, Melina Louro, Bruno Magalhaes, Catarina Maidanou, Maria Margiotta, Francesca Montresor, Marina Not, Fabrice Paredes, Estefanía Percopo, Isabella Péru, Erwan Poulain, Julie Præbel, Kim Rigaut-Jalabert, Fabienne Romac, Sarah Stavroulaki, Melanthia Souza Troncoso, Jesús Thiébaut, Eric Thomas, Wilfried Tkacz, Andrzej Trano, Anna Chiara Wincker, Patrick Pade, Nicolas |
| collection | PubMed - marine biology |
| contents | First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples. Pavloudi, Christina Santi, Ioulia Azua, Iñigo Baña, Zuriñe Bastianini, Mauro Belser, Caroline Bilbao, Jone Bitz-Thorsen, Julie Broudin, Caroline Camusat, Mathieu Cancio, Ibon Caray-Counil, Louis Casotti, Raffaella Castel, Jade Comtet, Thierry Cox, Cymon J Daguin, Claire Díaz de Cerio, Oihane Exter, Katrina Fauvelot, Cécile Frada, Miguel J Galand, Pierre E Garczarek, Laurence González Fernández, Jose Guillou, Laure Hablützel, Pascal I Heynderickx, Hanneloor Houbin, Céline Kervella, Anne Emmanuelle Krystallas, Apostolos Lagaisse, Rune Laroquette, Arnaud Lescure, Lyvia Lopes, Eva Loulakaki, Melina Louro, Bruno Magalhaes, Catarina Maidanou, Maria Margiotta, Francesca Montresor, Marina Not, Fabrice Paredes, Estefanía Percopo, Isabella Péru, Erwan Poulain, Julie Præbel, Kim Rigaut-Jalabert, Fabienne Romac, Sarah Stavroulaki, Melanthia Souza Troncoso, Jesús Thiébaut, Eric Thomas, Wilfried Tkacz, Andrzej Trano, Anna Chiara Wincker, Patrick Pade, Nicolas The European Marine Omics Biodiversity Observation Network (EMO BON) is an initiative of the European Marine Biological Resource Centre (EMBRC) to establish a persistent genomic observatory amongst designated European coastal marine sites, sharing the same protocols for sampling and data curation. Environmental samples are collected from the water column and, at some sites, soft sediments and hard substrates (Autonomous Reef Monitoring Structures - ARMS), together with a set of mandatory and discretionary metadata (including Essential Ocean Variables - EOVs). Samples are collected following standardised protocols at regular and specified intervals and sequenced in large six-monthly batches at a centralised sequencing facility. The use of standard operating procedures (SOPs) during data collection, library preparation and sequencing aims to provide uniformity amongst the data collected from the sites. Coupled with strict adherence to open and FAIR (Findable, Accessible, Interoperable, Reusable) data principles, this ensures maximum comparability amongst samples and enhances reusability and interoperability of the data with other data sources. The observatory network was launched in June 2021, when the first sampling campaign took place. |
| format | Artículo científico |
| id | pubmed_40115125 |
| institution | PubMed |
| language | en |
| publishDate | 2025 |
| publisher | Biodiversity data journal |
| record_format | pubmed |
| spellingShingle | First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples. Pavloudi, Christina Santi, Ioulia Azua, Iñigo Baña, Zuriñe Bastianini, Mauro Belser, Caroline Bilbao, Jone Bitz-Thorsen, Julie Broudin, Caroline Camusat, Mathieu Cancio, Ibon Caray-Counil, Louis Casotti, Raffaella Castel, Jade Comtet, Thierry Cox, Cymon J Daguin, Claire Díaz de Cerio, Oihane Exter, Katrina Fauvelot, Cécile Frada, Miguel J Galand, Pierre E Garczarek, Laurence González Fernández, Jose Guillou, Laure Hablützel, Pascal I Heynderickx, Hanneloor Houbin, Céline Kervella, Anne Emmanuelle Krystallas, Apostolos Lagaisse, Rune Laroquette, Arnaud Lescure, Lyvia Lopes, Eva Loulakaki, Melina Louro, Bruno Magalhaes, Catarina Maidanou, Maria Margiotta, Francesca Montresor, Marina Not, Fabrice Paredes, Estefanía Percopo, Isabella Péru, Erwan Poulain, Julie Præbel, Kim Rigaut-Jalabert, Fabienne Romac, Sarah Stavroulaki, Melanthia Souza Troncoso, Jesús Thiébaut, Eric Thomas, Wilfried Tkacz, Andrzej Trano, Anna Chiara Wincker, Patrick Pade, Nicolas First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples. Pavloudi, Christina Santi, Ioulia Azua, Iñigo Baña, Zuriñe Bastianini, Mauro Belser, Caroline Bilbao, Jone Bitz-Thorsen, Julie Broudin, Caroline Camusat, Mathieu Cancio, Ibon Caray-Counil, Louis Casotti, Raffaella Castel, Jade Comtet, Thierry Cox, Cymon J Daguin, Claire Díaz de Cerio, Oihane Exter, Katrina Fauvelot, Cécile Frada, Miguel J Galand, Pierre E Garczarek, Laurence González Fernández, Jose Guillou, Laure Hablützel, Pascal I Heynderickx, Hanneloor Houbin, Céline Kervella, Anne Emmanuelle Krystallas, Apostolos Lagaisse, Rune Laroquette, Arnaud Lescure, Lyvia Lopes, Eva Loulakaki, Melina Louro, Bruno Magalhaes, Catarina Maidanou, Maria Margiotta, Francesca Montresor, Marina Not, Fabrice Paredes, Estefanía Percopo, Isabella Péru, Erwan Poulain, Julie Præbel, Kim Rigaut-Jalabert, Fabienne Romac, Sarah Stavroulaki, Melanthia Souza Troncoso, Jesús Thiébaut, Eric Thomas, Wilfried Tkacz, Andrzej Trano, Anna Chiara Wincker, Patrick Pade, Nicolas The European Marine Omics Biodiversity Observation Network (EMO BON) is an initiative of the European Marine Biological Resource Centre (EMBRC) to establish a persistent genomic observatory amongst designated European coastal marine sites, sharing the same protocols for sampling and data curation. Environmental samples are collected from the water column and, at some sites, soft sediments and hard substrates (Autonomous Reef Monitoring Structures - ARMS), together with a set of mandatory and discretionary metadata (including Essential Ocean Variables - EOVs). Samples are collected following standardised protocols at regular and specified intervals and sequenced in large six-monthly batches at a centralised sequencing facility. The use of standard operating procedures (SOPs) during data collection, library preparation and sequencing aims to provide uniformity amongst the data collected from the sites. Coupled with strict adherence to open and FAIR (Findable, Accessible, Interoperable, Reusable) data principles, this ensures maximum comparability amongst samples and enhances reusability and interoperability of the data with other data sources. The observatory network was launched in June 2021, when the first sampling campaign took place. |
| title | First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples. |
| url | https://pubmed.ncbi.nlm.nih.gov/40115125/ |