Deletion of sf3b4 causes splicing defects and gene dysregulation that disrupt craniofacial development and survival.

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Main Authors: Griffin, Casey, Coppenrath, Kelsey, Khan, Doha, Lin, Ziyan, Horb, Marko, Saint-Jeannet, Jean-Pierre
Format: Artículo científico
Language:en
Published: Disease models & mechanisms 2025
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author Griffin, Casey
Coppenrath, Kelsey
Khan, Doha
Lin, Ziyan
Horb, Marko
Saint-Jeannet, Jean-Pierre
author_facet Griffin, Casey
Coppenrath, Kelsey
Khan, Doha
Lin, Ziyan
Horb, Marko
Saint-Jeannet, Jean-Pierre
Griffin, Casey
Coppenrath, Kelsey
Khan, Doha
Lin, Ziyan
Horb, Marko
Saint-Jeannet, Jean-Pierre
collection PubMed - marine biology
contents Deletion of sf3b4 causes splicing defects and gene dysregulation that disrupt craniofacial development and survival. Griffin, Casey Coppenrath, Kelsey Khan, Doha Lin, Ziyan Horb, Marko Saint-Jeannet, Jean-Pierre Animals RNA Splicing Factors Neural Crest RNA Splicing Gene Expression Regulation, Developmental Xenopus Gene Deletion Xenopus Proteins Skull Exons Cell Survival Cell Movement Embryo, Nonmammalian CRISPR-Cas Systems Cartilage Mandibulofacial Dysostosis Craniofacial Abnormalities Nager and Rodriguez syndromes are rare craniofacial and limb disorders characterized by midface retrusion, micrognathia, absent thumbs and radial hypoplasia. These disorders result from haploinsufficiency of SF3B4 (splicing factor 3b, subunit 4), a component of the pre-mRNA spliceosomal machinery. Although the spliceosome is present and functions in all cells of the body, most spliceosomopathies - including Nager and Rodriguez syndromes - are cell- or tissue-specific in their pathology. To understand the pathomechanism underlying these conditions, we generated a Xenopus tropicalis sf3b4 mutant line using CRISPR/Cas9 gene-editing technology. Homozygous deletion of sf3b4 is detrimental to the development of cranial neural crest (NC)-derived cartilage progenitors. Temporal RNA-sequencing analyses of mutant embryos identified an increase in exon-skipping events, followed by important transcriptional changes associated with an enrichment for terms consistent with defects in NC cell migration and survival. We propose that disruption of these processes may underly the pathogenesis of Nager and Rodriguez syndromes.
format Artículo científico
id pubmed_40126363
institution PubMed
language en
publishDate 2025
publisher Disease models & mechanisms
record_format pubmed
spellingShingle Deletion of sf3b4 causes splicing defects and gene dysregulation that disrupt craniofacial development and survival.
Griffin, Casey
Coppenrath, Kelsey
Khan, Doha
Lin, Ziyan
Horb, Marko
Saint-Jeannet, Jean-Pierre
Animals
RNA Splicing Factors
Neural Crest
RNA Splicing
Gene Expression Regulation, Developmental
Xenopus
Gene Deletion
Xenopus Proteins
Skull
Exons
Cell Survival
Cell Movement
Embryo, Nonmammalian
CRISPR-Cas Systems
Cartilage
Mandibulofacial Dysostosis
Craniofacial Abnormalities
Deletion of sf3b4 causes splicing defects and gene dysregulation that disrupt craniofacial development and survival. Griffin, Casey Coppenrath, Kelsey Khan, Doha Lin, Ziyan Horb, Marko Saint-Jeannet, Jean-Pierre Animals RNA Splicing Factors Neural Crest RNA Splicing Gene Expression Regulation, Developmental Xenopus Gene Deletion Xenopus Proteins Skull Exons Cell Survival Cell Movement Embryo, Nonmammalian CRISPR-Cas Systems Cartilage Mandibulofacial Dysostosis Craniofacial Abnormalities Nager and Rodriguez syndromes are rare craniofacial and limb disorders characterized by midface retrusion, micrognathia, absent thumbs and radial hypoplasia. These disorders result from haploinsufficiency of SF3B4 (splicing factor 3b, subunit 4), a component of the pre-mRNA spliceosomal machinery. Although the spliceosome is present and functions in all cells of the body, most spliceosomopathies - including Nager and Rodriguez syndromes - are cell- or tissue-specific in their pathology. To understand the pathomechanism underlying these conditions, we generated a Xenopus tropicalis sf3b4 mutant line using CRISPR/Cas9 gene-editing technology. Homozygous deletion of sf3b4 is detrimental to the development of cranial neural crest (NC)-derived cartilage progenitors. Temporal RNA-sequencing analyses of mutant embryos identified an increase in exon-skipping events, followed by important transcriptional changes associated with an enrichment for terms consistent with defects in NC cell migration and survival. We propose that disruption of these processes may underly the pathogenesis of Nager and Rodriguez syndromes.
title Deletion of sf3b4 causes splicing defects and gene dysregulation that disrupt craniofacial development and survival.
topic Animals
RNA Splicing Factors
Neural Crest
RNA Splicing
Gene Expression Regulation, Developmental
Xenopus
Gene Deletion
Xenopus Proteins
Skull
Exons
Cell Survival
Cell Movement
Embryo, Nonmammalian
CRISPR-Cas Systems
Cartilage
Mandibulofacial Dysostosis
Craniofacial Abnormalities
url https://pubmed.ncbi.nlm.nih.gov/40126363/