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| Auteurs principaux: | , , , , , , , , , , , , , , |
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| Format: | Artículo científico |
| Langue: | en |
| Publié: |
International journal of systematic and evolutionary microbiology
2025
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| Sujets: | |
| Accès en ligne: | https://pubmed.ncbi.nlm.nih.gov/40313181/ |
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| _version_ | 1868266209155219459 |
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| author | Pavloudi, Christina Shlafstein, Maximilian D De La Flor, Yesmarie T Smith, Emma M Peñuela, Ana C Papke, Erin Oliver, Lausanne Slattery, Kaitlynn Lissner, Guinevere Coelho, Lívia C Oline, David K Videau, Patrick Strangman, Wendy K Ushijima, Blake Saw, Jimmy H |
| author_facet | Pavloudi, Christina Shlafstein, Maximilian D De La Flor, Yesmarie T Smith, Emma M Peñuela, Ana C Papke, Erin Oliver, Lausanne Slattery, Kaitlynn Lissner, Guinevere Coelho, Lívia C Oline, David K Videau, Patrick Strangman, Wendy K Ushijima, Blake Saw, Jimmy H Pavloudi, Christina Shlafstein, Maximilian D De La Flor, Yesmarie T Smith, Emma M Peñuela, Ana C Papke, Erin Oliver, Lausanne Slattery, Kaitlynn Lissner, Guinevere Coelho, Lívia C Oline, David K Videau, Patrick Strangman, Wendy K Ushijima, Blake Saw, Jimmy H |
| collection | PubMed - marine biology |
| contents | sp. nov., a novel violacein-producing bacterium isolated from the Tidal Basin in Washington, D.C., USA. Pavloudi, Christina Shlafstein, Maximilian D De La Flor, Yesmarie T Smith, Emma M Peñuela, Ana C Papke, Erin Oliver, Lausanne Slattery, Kaitlynn Lissner, Guinevere Coelho, Lívia C Oline, David K Videau, Patrick Strangman, Wendy K Ushijima, Blake Saw, Jimmy H Phylogeny RNA, Ribosomal, 16S Indoles DNA, Bacterial Bacterial Typing Techniques Sequence Analysis, DNA District of Columbia Base Composition Seawater Oxalobacteraceae Genome, Bacterial Fatty Acids Strain TB1-E2-13 was isolated from water collected from the Tidal Basin in Washington, D.C., USA, due to the bright purple colour of its colonies, and was taxonomically evaluated with a polyphasic approach. Comparison of a partial 16S rRNA gene sequence found that strain TB1-E2-13 was most similar to species in the genus. For more precise taxonomic inference, a phylogenomic analysis was conducted and indicated that strain TB1-E2-13 was most closely related to , '', and . Analyses of genomic indices found that pairwise comparisons between strain TB1-E2-13 and other members of the genus returned values below the threshold of species novelty. Based on a polyphasic characterization and identifying differences in genomic and taxonomic data, strain TB1-E2-13 represents a novel species, for which the name sp. nov. is proposed. The type strain is TB1-E2-13 (=ATCC TSD-339=JCM 36076). |
| format | Artículo científico |
| id | pubmed_40313181 |
| institution | PubMed |
| language | en |
| publishDate | 2025 |
| publisher | International journal of systematic and evolutionary microbiology |
| record_format | pubmed |
| spellingShingle | sp. nov., a novel violacein-producing bacterium isolated from the Tidal Basin in Washington, D.C., USA. Pavloudi, Christina Shlafstein, Maximilian D De La Flor, Yesmarie T Smith, Emma M Peñuela, Ana C Papke, Erin Oliver, Lausanne Slattery, Kaitlynn Lissner, Guinevere Coelho, Lívia C Oline, David K Videau, Patrick Strangman, Wendy K Ushijima, Blake Saw, Jimmy H Phylogeny RNA, Ribosomal, 16S Indoles DNA, Bacterial Bacterial Typing Techniques Sequence Analysis, DNA District of Columbia Base Composition Seawater Oxalobacteraceae Genome, Bacterial Fatty Acids sp. nov., a novel violacein-producing bacterium isolated from the Tidal Basin in Washington, D.C., USA. Pavloudi, Christina Shlafstein, Maximilian D De La Flor, Yesmarie T Smith, Emma M Peñuela, Ana C Papke, Erin Oliver, Lausanne Slattery, Kaitlynn Lissner, Guinevere Coelho, Lívia C Oline, David K Videau, Patrick Strangman, Wendy K Ushijima, Blake Saw, Jimmy H Phylogeny RNA, Ribosomal, 16S Indoles DNA, Bacterial Bacterial Typing Techniques Sequence Analysis, DNA District of Columbia Base Composition Seawater Oxalobacteraceae Genome, Bacterial Fatty Acids Strain TB1-E2-13 was isolated from water collected from the Tidal Basin in Washington, D.C., USA, due to the bright purple colour of its colonies, and was taxonomically evaluated with a polyphasic approach. Comparison of a partial 16S rRNA gene sequence found that strain TB1-E2-13 was most similar to species in the genus. For more precise taxonomic inference, a phylogenomic analysis was conducted and indicated that strain TB1-E2-13 was most closely related to , '', and . Analyses of genomic indices found that pairwise comparisons between strain TB1-E2-13 and other members of the genus returned values below the threshold of species novelty. Based on a polyphasic characterization and identifying differences in genomic and taxonomic data, strain TB1-E2-13 represents a novel species, for which the name sp. nov. is proposed. The type strain is TB1-E2-13 (=ATCC TSD-339=JCM 36076). |
| title | sp. nov., a novel violacein-producing bacterium isolated from the Tidal Basin in Washington, D.C., USA. |
| topic | Phylogeny RNA, Ribosomal, 16S Indoles DNA, Bacterial Bacterial Typing Techniques Sequence Analysis, DNA District of Columbia Base Composition Seawater Oxalobacteraceae Genome, Bacterial Fatty Acids |
| url | https://pubmed.ncbi.nlm.nih.gov/40313181/ |