Benchmarking Differential Abundance Tests for 16S microbiome sequencing data using simulated data based on experimental templates.
Fuente:
PubMed
Enregistré dans:
| Auteurs principaux: | Kohnert, Eva, Kreutz, Clemens |
|---|---|
| Format: | Artículo científico |
| Langue: | en |
| Publié: |
PloS one
2025
|
| Sujets: | |
| Accès en ligne: | |
| Tags: |
Ajouter un tag
Pas de tags, Soyez le premier à ajouter un tag!
|
Documents similaires
Taxonomic and Functional Features of Surface to Deep-Sea Prokaryotic Communities in the Eastern North Pacific Ocean.
par: De Corte, Daniele, et autres
Publié: (2025)
par: De Corte, Daniele, et autres
Publié: (2025)
Taxonomic variability and functional stability across Oregon coastal subsurface microbiomes.
par: Soufi, Hengameh H, et autres
Publié: (2024)
par: Soufi, Hengameh H, et autres
Publié: (2024)
Exploring the Ocean's Microbial World: Techniques and Protocols for Microbiome Research.
par: Rangamaran, Vijaya Raghavan, et autres
Publié: (2026)
par: Rangamaran, Vijaya Raghavan, et autres
Publié: (2026)
Eutrophication Reshapes Microbial Communities and Life-History Strategies in the Riverine Ecosystems.
par: Li, Haizhou, et autres
Publié: (2025)
par: Li, Haizhou, et autres
Publié: (2025)
nf-mucimmuno/dada2_16S
par: Macowan, Matthew, et autres
Publié: (2025)
par: Macowan, Matthew, et autres
Publié: (2025)
Metagenomic analysis of deep-sea bacterial communities in the Makassar and Lombok Straits.
par: Siallagan, Zen Ladestam, et autres
Publié: (2024)
par: Siallagan, Zen Ladestam, et autres
Publié: (2024)
Quantifying Soil Microbiome Abundance by Metatranscriptomics and Complementary Molecular Techniques-Cross-Validation and Perspectives.
par: Dahl, Mathilde Borg, et autres
Publié: (2025)
par: Dahl, Mathilde Borg, et autres
Publié: (2025)
Metagenomic surveys show a widespread diffusion of antibiotic resistance genes in a transect from urbanized to marine protected area.
par: Alonso-Vásquez, Tania, et autres
Publié: (2025)
par: Alonso-Vásquez, Tania, et autres
Publié: (2025)
Understanding Hepatopancreas-Associated Microbiota in the Supralittoral Tylos ponticus (Crustacea, Isopoda, Oniscidea): Insights from Next-Generation Sequencing Approaches.
par: Davolos, Domenico, et autres
Publié: (2026)
par: Davolos, Domenico, et autres
Publié: (2026)
Sea cucumber grazing linked to enrichment of anaerobic microbial metabolisms in coral reef sediments.
par: Maritan, Andrew J, et autres
Publié: (2025)
par: Maritan, Andrew J, et autres
Publié: (2025)
Benchmarking Cost-Effective DNA Extraction Kits for Diverse Metagenomic Samples.
par: Sobolev, Andrey, et autres
Publié: (2025)
par: Sobolev, Andrey, et autres
Publié: (2025)
Seasonal recurrence and modular assembly of an Arctic pelagic marine microbiome.
par: Priest, Taylor, et autres
Publié: (2025)
par: Priest, Taylor, et autres
Publié: (2025)
Exploring the Biosynthetic Potential of Microorganisms from the South China Sea Cold Seep Using Culture-Dependent and Culture-Independent Approaches.
par: Hu, Gang-Ao, et autres
Publié: (2025)
par: Hu, Gang-Ao, et autres
Publié: (2025)
Ecological drivers of CRISPR immune systems.
par: Xiao, Wei, et autres
Publié: (2024)
par: Xiao, Wei, et autres
Publié: (2024)
Putative promiscuous symbionts in deep-sea corals and crinoids may contribute to nitrogen cycling.
par: Modolon, Flúvio, et autres
Publié: (2025)
par: Modolon, Flúvio, et autres
Publié: (2025)
A Comprehensive Evaluation of Taxonomic Classifiers in Marine Vertebrate eDNA Studies.
par: Bayer, Philipp E, et autres
Publié: (2025)
par: Bayer, Philipp E, et autres
Publié: (2025)
Jellyfish blooms-an overlooked hotspot and potential vector for the transmission of antimicrobial resistance in marine environments.
par: Elena, Alan X, et autres
Publié: (2025)
par: Elena, Alan X, et autres
Publié: (2025)
Host Evolutionary History Drives Prokaryotic Diversity in the Globally Distributed Sponge Family Petrosiidae.
par: van der Windt, N, et autres
Publié: (2025)
par: van der Windt, N, et autres
Publié: (2025)
Ecological success in freshwater lakes: insights from novel cultivated lineages of the abundant Nanopelagicales order.
par: Chiriac, Maria-Cecilia, et autres
Publié: (2025)
par: Chiriac, Maria-Cecilia, et autres
Publié: (2025)
Unveiling microbial succession dynamics on different plastic surfaces using WGCNA.
par: Davidov, Keren, et autres
Publié: (2025)
par: Davidov, Keren, et autres
Publié: (2025)
Increased temperature enhances microbial-mediated lignin decomposition in river sediment.
par: Li, Jialing, et autres
Publié: (2025)
par: Li, Jialing, et autres
Publié: (2025)
Microbial community's shifts in an Andean glacier-fed watershed under anthropogenic pressures.
par: Mayol, Eva, et autres
Publié: (2026)
par: Mayol, Eva, et autres
Publié: (2026)
Seasonal Cycles in a Seaweed Holobiont: A Multiyear Time Series Reveals Repetitive Microbial Shifts and Core Taxa.
par: Mudlaff, Chantal Marie, et autres
Publié: (2025)
par: Mudlaff, Chantal Marie, et autres
Publié: (2025)
Stratification-driven divergence between taxonomic and functional diversity in a deep lake microbiome.
par: Ding, Jianing, et autres
Publié: (2025)
par: Ding, Jianing, et autres
Publié: (2025)
Manipulation of the Symbiodiniaceae microbiome confers multigenerational impacts on symbioses and reproductive ecology of its Exaiptasia diaphana host.
par: McCauley, Mark, et autres
Publié: (2025)
par: McCauley, Mark, et autres
Publié: (2025)
A Targeted Reference Database for Improved Analysis of Environmental 16S rRNA Oxford Nanopore Sequencing Data.
par: Philip, Melcy, et autres
Publié: (2025)
par: Philip, Melcy, et autres
Publié: (2025)
Establishing the ELIXIR Microbiome Community.
par: Finn, Robert D, et autres
Publié: (2024)
par: Finn, Robert D, et autres
Publié: (2024)
Extensive data mining uncovers novel diversity among members of the rare biosphere within the Thermoplasmatota.
par: Maeke, Mara D, et autres
Publié: (2025)
par: Maeke, Mara D, et autres
Publié: (2025)
Ecophysiology and global dispersal of the freshwater SAR11-IIIb genus Fontibacterium.
par: Fernandes, Clafy, et autres
Publié: (2025)
par: Fernandes, Clafy, et autres
Publié: (2025)
From classification to confirmation: verifying taxonomic classifications by mapping metagenomic reads to reference genomes.
par: Wright, Robyn J, et autres
Publié: (2026)
par: Wright, Robyn J, et autres
Publié: (2026)
Capturing the spatial structure of the benthic microbiome under an intensive aquaculture scenario in Chilean Patagonia.
par: Zárate, Ana, et autres
Publié: (2025)
par: Zárate, Ana, et autres
Publié: (2025)
Depuration of a solitary ascidian depletes transient bacteria without altering microbiome alpha-diversity.
par: Hutchings, Brenna, et autres
Publié: (2025)
par: Hutchings, Brenna, et autres
Publié: (2025)
Symbiodiniaceae and Bacterial Microbiome Dynamics Differentially Impact the Survival of Dominant Reef-Flat Porites Corals.
par: Lock, Colin, et autres
Publié: (2025)
par: Lock, Colin, et autres
Publié: (2025)
Perfoliate Pondweed Meadows in Northern Coastal Areas-Reservoirs of Diverse Bacteria With Pathogenic Traits and Complex Carbon Metabolism.
par: Ramasamy, Kesava Priyan, et autres
Publié: (2025)
par: Ramasamy, Kesava Priyan, et autres
Publié: (2025)
More Than a Stick in the Mud: Eelgrass Leaf and Root Bacterial Communities Are Distinct From Those on Physical Mimics.
par: Kardish, Melissa R, et autres
Publié: (2025)
par: Kardish, Melissa R, et autres
Publié: (2025)
Exploring the plant-growth promoting bacterium Herbaspirillum seropedicae as catalyst of microbiome remodeling and metabolic changes in wheat plants.
par: Carril, Pablo, et autres
Publié: (2025)
par: Carril, Pablo, et autres
Publié: (2025)
Extracellular electron transfer genes expressed by candidate flocking bacteria in cable bacteria sediment.
par: Lustermans, Jamie J M, et autres
Publié: (2025)
par: Lustermans, Jamie J M, et autres
Publié: (2025)
The archaeal class is a key component of the reproductive microbiome in sponges during gametogenesis.
par: Turon, Marta, et autres
Publié: (2025)
par: Turon, Marta, et autres
Publié: (2025)
Effects of low wildfire burn severity due to pre-fire shrub thinning on the chaparral soil bacteriome in the Santa Monica Mountains of Southern California.
par: Macias, Mariah, et autres
Publié: (2025)
par: Macias, Mariah, et autres
Publié: (2025)
Microbial Community Structure in Contrasting Hawaiian Coastal Sediments.
par: Van Heurck, Benjamin, et autres
Publié: (2025)
par: Van Heurck, Benjamin, et autres
Publié: (2025)
Documents similaires
-
Taxonomic and Functional Features of Surface to Deep-Sea Prokaryotic Communities in the Eastern North Pacific Ocean.
par: De Corte, Daniele, et autres
Publié: (2025) -
Taxonomic variability and functional stability across Oregon coastal subsurface microbiomes.
par: Soufi, Hengameh H, et autres
Publié: (2024) -
Exploring the Ocean's Microbial World: Techniques and Protocols for Microbiome Research.
par: Rangamaran, Vijaya Raghavan, et autres
Publié: (2026) -
Eutrophication Reshapes Microbial Communities and Life-History Strategies in the Riverine Ecosystems.
par: Li, Haizhou, et autres
Publié: (2025) -
nf-mucimmuno/dada2_16S
par: Macowan, Matthew, et autres
Publié: (2025)