Saved in:
| Main Authors: | , , , , , , , , , , , , , |
|---|---|
| Format: | Artículo científico |
| Language: | en |
| Published: |
Wellcome open research
2025
|
| Online Access: | https://pubmed.ncbi.nlm.nih.gov/40548332/ |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| _version_ | 1868266188974325761 |
|---|---|
| author | Pita, Lucia Maldonado, Manuel Koutsouveli, Vassiliki Riesgo, Ana Hentschel, Ute Oatley, Graeme Sinclair, Elizabeth Aunin, Eerik Gettle, Noah Santos, Camilla Paulini, Michael Niu, Haoyu McKenna, Victoria O'Brien, Rebecca |
| author_facet | Pita, Lucia Maldonado, Manuel Koutsouveli, Vassiliki Riesgo, Ana Hentschel, Ute Oatley, Graeme Sinclair, Elizabeth Aunin, Eerik Gettle, Noah Santos, Camilla Paulini, Michael Niu, Haoyu McKenna, Victoria O'Brien, Rebecca Pita, Lucia Maldonado, Manuel Koutsouveli, Vassiliki Riesgo, Ana Hentschel, Ute Oatley, Graeme Sinclair, Elizabeth Aunin, Eerik Gettle, Noah Santos, Camilla Paulini, Michael Niu, Haoyu McKenna, Victoria O'Brien, Rebecca |
| collection | PubMed - marine biology |
| contents | The chromosomal genome sequence of the kidney sponge, Nardo, 1847, and its associated microbial metagenome sequences. Pita, Lucia Maldonado, Manuel Koutsouveli, Vassiliki Riesgo, Ana Hentschel, Ute Oatley, Graeme Sinclair, Elizabeth Aunin, Eerik Gettle, Noah Santos, Camilla Paulini, Michael Niu, Haoyu McKenna, Victoria O'Brien, Rebecca We present a genome assembly from a specimen of (kidney sponge; Porifera; Demospongiae; Chondrillida; Chondrillidae). The genome sequence has a total length of 117.37 megabases. Most of the assembly (99.98%) is scaffolded into 14 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 17.45 kilobases in length. Several symbiotic bacterial genomes were assembled as MAGs. Gene annotation of the host organism assembly on Ensembl identified 17,340 protein-coding genes. The metagenome of the specimen was also assembled and 53 binned bacterial genomes were identified, including 40 high-quality MAGs that were representative of a typical high microbial abundance sponge and included three candiate phyla (Poribacteria, Latescibacteria, Binatota). |
| format | Artículo científico |
| id | pubmed_40548332 |
| institution | PubMed |
| language | en |
| publishDate | 2025 |
| publisher | Wellcome open research |
| record_format | pubmed |
| spellingShingle | The chromosomal genome sequence of the kidney sponge, Nardo, 1847, and its associated microbial metagenome sequences. Pita, Lucia Maldonado, Manuel Koutsouveli, Vassiliki Riesgo, Ana Hentschel, Ute Oatley, Graeme Sinclair, Elizabeth Aunin, Eerik Gettle, Noah Santos, Camilla Paulini, Michael Niu, Haoyu McKenna, Victoria O'Brien, Rebecca The chromosomal genome sequence of the kidney sponge, Nardo, 1847, and its associated microbial metagenome sequences. Pita, Lucia Maldonado, Manuel Koutsouveli, Vassiliki Riesgo, Ana Hentschel, Ute Oatley, Graeme Sinclair, Elizabeth Aunin, Eerik Gettle, Noah Santos, Camilla Paulini, Michael Niu, Haoyu McKenna, Victoria O'Brien, Rebecca We present a genome assembly from a specimen of (kidney sponge; Porifera; Demospongiae; Chondrillida; Chondrillidae). The genome sequence has a total length of 117.37 megabases. Most of the assembly (99.98%) is scaffolded into 14 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 17.45 kilobases in length. Several symbiotic bacterial genomes were assembled as MAGs. Gene annotation of the host organism assembly on Ensembl identified 17,340 protein-coding genes. The metagenome of the specimen was also assembled and 53 binned bacterial genomes were identified, including 40 high-quality MAGs that were representative of a typical high microbial abundance sponge and included three candiate phyla (Poribacteria, Latescibacteria, Binatota). |
| title | The chromosomal genome sequence of the kidney sponge, Nardo, 1847, and its associated microbial metagenome sequences. |
| url | https://pubmed.ncbi.nlm.nih.gov/40548332/ |