Imagen de Portada

A case for absolute gene expression estimates in microbiome studies using metatranscriptomics.

Fuente: PubMed

Guardado en:

Detalles Bibliográficos
Autores principales:	Perneel, Michiel, Alexander, Harriet, Hablützel, Pascal I, Maere, Steven
Formato:	Artículo científico
Lenguaje:	en
Publicado:	The ISME journal 2025
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

Consistent multi-animal pose estimation in cattle using dynamic Kalman filter based tracking
por: Perneel, Maarten, et al.
Publicado: (2025)

The gut microbiome, single nucleotide polymorphisms, and differentially expressed genes promote aggression in an ant
por: Krapf, Patrick, et al.
Publicado: (2026)

Accession data for analysed Xestospongia testudinaria metatranscriptomes
por: Jahn, Martin T, et al.
Publicado: (2016)

The absolute seawater entropy: Part II. Case studies
por: Marquet, Pascal
Publicado: (2024)

Studying the genetic basis of ecological interactions with intergenomic epistasis
por: Loraine Hablützel, et al.
Publicado: (2025)

Marine influence on airborne bacterial community composition and predicted functional potential in coastal zones: a case study from Ostend, Belgium.
por: Li, Yunmeng, et al.
Publicado: (2026)

The North Pacific Eukaryotic Gene Catalog of metatranscriptome assemblies and annotations.
por: Groussman, R D, et al.
Publicado: (2024)

The heterogeneous wound microbiome varies with wound care pain, dressing type, and inflammatory gene expression
por: Amy Campbell, et al.
Publicado: (2024)

Ion torrent-based nasopharyngeal swab metatranscriptomics in COVID-19
por: Campos, Gubio, et al.
Publicado: (2020)

HulaChrimson: A Chrimson-like cation channelrhodopsin discovered using freshwater metatranscriptomics from Lake Hula
por: Takahashi, Hiroto, et al.
Publicado: (2025)

Improved absolute abundance estimates from spatial count data with simulation and microfossil case studies
por: Mays, Chris, et al.
Publicado: (2024)

Seawater carbonate chemistry and biosynthesis of polyunsaturated fatty acids in a benthic harpacticoid copepod
por: Boyen, Jens, et al.
Publicado: (2025)

michellepistner/scale-in-aldex2: Code for "Incorporating scale uncertainty in microbiome and gene expression analysis as an extension of normalization"
por: Michelle (Pistner) Nixon
Publicado: (2025)

The Unreliable Job Selection and Sequencing Problem
por: Agnetis, Alessandro, et al.
Publicado: (2025)

Temperature, pH, and diet interactively affect biosynthesis of polyunsaturated fatty acids in a benthic harpacticoid copepod
por: Jens Boyen, et al.
Publicado: (2024)

Nematodes alter the taxonomic and functional profiles of benthic bacterial communities: A metatranscriptomic approach
por: Rodgee Mae Guden, et al.
Publicado: (2024)

The absolute seawater entropy: Part I. Definition
por: Marquet, Pascal
Publicado: (2024)

On the absolute entropy of monatomic bodies
por: Marquet, Pascal, et al.
Publicado: (2024)

Hybridization and gene expression: Beyond differentially expressed genes
por: Anna Runemark, et al.
Publicado: (2024)

A high-resolution diel survey of surface ocean metagenomes, metatranscriptomes, and transfer RNA transcripts.
por: Tucker, Sarah J, et al.
Publicado: (2025)

MOSCA 2.0: A bioinformatics framework for metagenomics, metatranscriptomics and metaproteomics data analysis and visualization
por: João C. Sequeira, et al.
Publicado: (2024)

From human to superhuman: the impact of the microbiome on physiology.
por: Keely, Stephen J, et al.
Publicado: (2025)

From human to superhuman: the impact of the microbiome on physiology
por: Stephen J. Keely, et al.
Publicado: (2025)

Arbuscular mycorrhizal fungal community abundance, functions, and symbiotic interactions revealed by root metatranscriptomes
por: Peilin Chen, et al.
Publicado: (2026)

Predicting the genetic component of gene expression using gene regulatory networks
por: Mohammad, Gutama Ibrahim, et al.
Publicado: (2024)

Generating Music with Structure Using Self-Similarity as Attention
por: Hager, Sophia, et al.
Publicado: (2024)

Parasitological survey and genetic variants of East African cichlids
por: Meyer, Britta S, et al.
Publicado: (2018)

Parasitological survey of 23 cichlid species for metazoan ecto- and endoparasites
por: Meyer, Britta S, et al.
Publicado: (2018)

Alignment of genetic variants of the MHC class II loci of East African cichlids
por: Meyer, Britta S, et al.
Publicado: (2018)

Decoding mycobacterial ecology in Sub-Saharan African wastewater: metagenomic and metatranscriptomic insights for tuberculosis surveillance.
por: Mtetwa, Hlengiwe N, et al.
Publicado: (2026)

RTTAP: Empowering metatranscriptomic data analysis with a read‐based total‐infectome taxonomic solution
por: Wei Jiang, et al.
Publicado: (2025)

Identification of housekeeping gene for future studies exploring effects of cryopreservation on gene expression in shrimp.
por: Chen, Yen-Po, et al.
Publicado: (2025)

Accu16S/AccuITS: Accurate and broadly applicable amplicon sequencing for absolute microbiome quantification
por: Defeng Bai, et al.
Publicado: (2026)

Endocannabinoid system gene expression in mesocorticolimbic brain regions of individuals with alcohol use disorder: A descriptive study
por: María Salud García‐Gutiérrez, et al.
Publicado: (2025)

Water mass specific genes dominate the Southern Ocean microbiome.
por: Faure, Emile, et al.
Publicado: (2026)

Seasonal dynamics of bacterial community structure and function in the surf zone seawater of a recreational beach in Ostend, Belgium.
por: Li, Yunmeng, et al.
Publicado: (2024)

Seawater carbonate chemistry and gene expression in Mytilus edulis
por: Mincarelli, Luana Fiorella, et al.
Publicado: (2022)

Blood gene expression network expression strongly relates to brain amyloid burden
por: Vaibhav A. Janve, et al.
Publicado: (2025)

List of differentially expressed genes
por: Kim, Se Jin
Publicado: (2025)

Non-Markovian gene expression
por: Vilk, Ohad, et al.
Publicado: (2023)