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Main Authors: Kelliher, Julia M, Mirzayi, Chloe, Bordenstein, Sarah R, Oliver, Aaron, Kellogg, Christina A, Hatcher, Eneida L, Berg, Maureen, Baldrian, Petr, Aljumaah, Mashael, Miller, Cassandra Maria Luz, Mungall, Christopher, Novak, Vlastimil, Palucki, Alexis, Smith, Ethan, Tabassum, Nazifa, Bonito, Gregory, Brister, J Rodney, Chain, Patrick S G, Chen, Mingfei, Degregori, Samuel, Dundore-Arias, Jose Pablo, Emerson, Joanne B, Moreira C Fernandes, Vanessa, Flores, Roberto, Gonzalez, Antonio, Hansen, Zoe A, Jackson, Scott A, Moustafa, Ahmed M, Northen, Trent R, Pariente, Nonia, Pett-Ridge, Jennifer, Record, Sydne, Reji, Linta, Reysenbach, Anna-Louise, Rich, Virginia I, Richardson, Lorna, Roux, Simon, Schriml, Lynn M, Shabman, Reed S, Sierra, Maria A, Sullivan, Matthew B, Sundaramurthy, Punithavathi, Thibault, Katherine M, Thompson, Luke R, Tighe, Scott, Vereen, Ethell, Eloe-Fadrosh, Emiley A
Format: Artículo científico
Language:en
Published: Nature microbiology 2025
Subjects:
Humans
Microbiota
Guidelines as Topic
Research Design
Rivers
Online Access:https://pubmed.ncbi.nlm.nih.gov/41326814/
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Table of Contents:
  • STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies. Kelliher, Julia M Mirzayi, Chloe Bordenstein, Sarah R Oliver, Aaron Kellogg, Christina A Hatcher, Eneida L Berg, Maureen Baldrian, Petr Aljumaah, Mashael Miller, Cassandra Maria Luz Mungall, Christopher Novak, Vlastimil Palucki, Alexis Smith, Ethan Tabassum, Nazifa Bonito, Gregory Brister, J Rodney Chain, Patrick S G Chen, Mingfei Degregori, Samuel Dundore-Arias, Jose Pablo Emerson, Joanne B Moreira C Fernandes, Vanessa Flores, Roberto Gonzalez, Antonio Hansen, Zoe A Jackson, Scott A Moustafa, Ahmed M Northen, Trent R Pariente, Nonia Pett-Ridge, Jennifer Record, Sydne Reji, Linta Reysenbach, Anna-Louise Rich, Virginia I Richardson, Lorna Roux, Simon Schriml, Lynn M Shabman, Reed S Sierra, Maria A Sullivan, Matthew B Sundaramurthy, Punithavathi Thibault, Katherine M Thompson, Luke R Tighe, Scott Vereen, Ethell Eloe-Fadrosh, Emiley A Humans Microbiota Guidelines as Topic Research Design Rivers The interdisciplinary nature of microbiome research, coupled with the generation of complex multi-omics data, makes knowledge sharing challenging. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines provide a checklist for the reporting of study information, experimental design and analytical methods within a scientific manuscript on human microbiome research. Here, in this Consensus Statement, we present the standards for technical reporting in environmental and host-associated microbiome studies (STREAMS) guidelines. The guidelines expand on STORMS and include 67 items to support the reporting and review of environmental (for example, terrestrial, aquatic, atmospheric and engineered), synthetic and non-human host-associated microbiome studies in a standardized and machine-actionable manner. Based on input from 248 researchers spanning 28 countries, we provide detailed guidance, including comparisons with STORMS, and case studies that demonstrate the usage of the STREAMS guidelines. STREAMS, like STORMS, will be a living community resource updated by the Consortium with consensus-building input of the broader community.

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