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Main Authors: Unzueta-Martínez, Andrea, Delaney, Jennifer A, Morkeski, Kate, Ross, Abby, Wang, Zhaohui Aleck, Girguis, Peter R
Format: Artículo científico
Language:en
Published: Proceedings of the National Academy of Sciences of the United States of America 2026
Subjects:
Online Access:https://pubmed.ncbi.nlm.nih.gov/41805583/
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author Unzueta-Martínez, Andrea
Delaney, Jennifer A
Morkeski, Kate
Ross, Abby
Wang, Zhaohui Aleck
Girguis, Peter R
author_facet Unzueta-Martínez, Andrea
Delaney, Jennifer A
Morkeski, Kate
Ross, Abby
Wang, Zhaohui Aleck
Girguis, Peter R
Unzueta-Martínez, Andrea
Delaney, Jennifer A
Morkeski, Kate
Ross, Abby
Wang, Zhaohui Aleck
Girguis, Peter R
collection PubMed - marine biology
contents Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry. Unzueta-Martínez, Andrea Delaney, Jennifer A Morkeski, Kate Ross, Abby Wang, Zhaohui Aleck Girguis, Peter R Animals Microbiota Calcification, Physiologic Hydrogen-Ion Concentration Ostreidae Transcriptome Seawater Marine animals that build shells, such as oysters, carefully regulate the chemistry of their internal calcifying fluids, but the molecular mechanisms behind this control, as well as whether microbes play a role in calcification, are poorly understood. To better understand oysters' molecular mechanisms and the role of their calcifying-fluid microbes, we conducted experiments that simulated a tidal cycle, measured calcifying fluid pH and total dissolved inorganic carbon, and characterized host and microbial gene expression via transcriptomics. These experiments showed that calcifying fluid pH remained relatively stable throughout tidal pH fluctuations, with corresponding increases in oyster transcripts for ion transport and acid-base regulation. These data provide direct evidence that tidal fluctuations drive rapid changes in oyster calcifying fluid chemistry. Most surprisingly, increases in microbial transcripts related to nitrogen and sulfur cycling correlated to higher calcifying fluid DIC, and coexpression network analysis revealed patterns of gene expression that linked oyster immune and neural pathways to microbial redox processes, providing molecular evidence of potential host modulation of microbial metabolism. Together, these results reveal that oysters actively regulate their calcifying fluid pH over short timescales, and the endemic microbiome metabolic responses can yield metabolites that influence calcifying fluid pH, alkalinity, and ultimately calcification. These data offer a perspective on oyster physiological capacity and, most importantly, the potential role of microbes in oyster calcification. In light of ongoing changes in ocean pH and temperature, oysters provide a model for studying animal-microbial responses to environmental acidification and how their interactions may shape biomineralization.
format Artículo científico
id pubmed_41805583
institution PubMed
language en
publishDate 2026
publisher Proceedings of the National Academy of Sciences of the United States of America
record_format pubmed
spellingShingle Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry.
Unzueta-Martínez, Andrea
Delaney, Jennifer A
Morkeski, Kate
Ross, Abby
Wang, Zhaohui Aleck
Girguis, Peter R
Animals
Microbiota
Calcification, Physiologic
Hydrogen-Ion Concentration
Ostreidae
Transcriptome
Seawater
Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry. Unzueta-Martínez, Andrea Delaney, Jennifer A Morkeski, Kate Ross, Abby Wang, Zhaohui Aleck Girguis, Peter R Animals Microbiota Calcification, Physiologic Hydrogen-Ion Concentration Ostreidae Transcriptome Seawater Marine animals that build shells, such as oysters, carefully regulate the chemistry of their internal calcifying fluids, but the molecular mechanisms behind this control, as well as whether microbes play a role in calcification, are poorly understood. To better understand oysters' molecular mechanisms and the role of their calcifying-fluid microbes, we conducted experiments that simulated a tidal cycle, measured calcifying fluid pH and total dissolved inorganic carbon, and characterized host and microbial gene expression via transcriptomics. These experiments showed that calcifying fluid pH remained relatively stable throughout tidal pH fluctuations, with corresponding increases in oyster transcripts for ion transport and acid-base regulation. These data provide direct evidence that tidal fluctuations drive rapid changes in oyster calcifying fluid chemistry. Most surprisingly, increases in microbial transcripts related to nitrogen and sulfur cycling correlated to higher calcifying fluid DIC, and coexpression network analysis revealed patterns of gene expression that linked oyster immune and neural pathways to microbial redox processes, providing molecular evidence of potential host modulation of microbial metabolism. Together, these results reveal that oysters actively regulate their calcifying fluid pH over short timescales, and the endemic microbiome metabolic responses can yield metabolites that influence calcifying fluid pH, alkalinity, and ultimately calcification. These data offer a perspective on oyster physiological capacity and, most importantly, the potential role of microbes in oyster calcification. In light of ongoing changes in ocean pH and temperature, oysters provide a model for studying animal-microbial responses to environmental acidification and how their interactions may shape biomineralization.
title Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry.
topic Animals
Microbiota
Calcification, Physiologic
Hydrogen-Ion Concentration
Ostreidae
Transcriptome
Seawater
url https://pubmed.ncbi.nlm.nih.gov/41805583/