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Autori principali: Asadi Gharabaghi, Sara, Ben Hamadou, Radhouan, Flot, Jean-François, Beji, Marwa, Shokri, Mohammad Reza
Natura: Artículo científico
Lingua:en
Pubblicazione: Integrative and comparative biology 2026
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Accesso online:https://pubmed.ncbi.nlm.nih.gov/41894221/
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author Asadi Gharabaghi, Sara
Ben Hamadou, Radhouan
Flot, Jean-François
Beji, Marwa
Shokri, Mohammad Reza
author_facet Asadi Gharabaghi, Sara
Ben Hamadou, Radhouan
Flot, Jean-François
Beji, Marwa
Shokri, Mohammad Reza
Asadi Gharabaghi, Sara
Ben Hamadou, Radhouan
Flot, Jean-François
Beji, Marwa
Shokri, Mohammad Reza
collection PubMed - marine biology
contents Seasonal and Depth-Driven Shifts in Coral-Associated Microbial Communities Under Extreme Environmental Conditions in the Persian Gulf. Asadi Gharabaghi, Sara Ben Hamadou, Radhouan Flot, Jean-François Beji, Marwa Shokri, Mohammad Reza Anthozoa Animals Seasons Microbiota RNA, Ribosomal, 16S Coral Reefs Indian Ocean Archaea Extreme Environments Bacteria Iran Qatar Coral-associated microbial communities are vital to coral resilience under environmental stress. We characterized the microbiomes of five scleractinian species-Porites harrisoni, Platygyra daedalea, Pavona decussata, Acropora downingi, and Acropora microphthalma-from northern (Kish, Iran) and southern (Sheraoh, Qatar) Persian Gulf reefs using full-length 16S rRNA sequencing. Sampling across seasons (winter and summer) and depths (shallow: 4-5 m; deep: 10-18 m) enabled comparison of diversity and reference-based taxonomic composition. A total of 3,984 unique taxonomic units were resolved using a full-length alignment-based approach (Emu). Microbial taxon richness was higher in deep reefs (Kish: 1,900; Sheraoh: 1,800) compared to shallow sites (∼1,300), with overall seasonal declines observed. Microbiomes comprised bacteria (70.9%), dominated by Pseudomonadota (62.4%), and archaea (21.9%) including Halobacteriota, Thermoproteota, Thermoplasmatota, Methanobacteriota, and Candidatus Korarchaeota. Species-specific restructuring included declines in Pseudomonadota for P. harrisoni (from 85.05% to 70.1%) and P. daedalea (from 75.0% to 50.05%), whereas A. downingi exhibited a sharp increase (from 2.0% to 52.3%). Notably, A. microphthalma remained archaea-dominated (>88%) year-round, suggesting potential functional stability under extreme conditions. These results demonstrate that depth, season, and host species shape microbial assemblages and highlight archaeal lineages and hydrocarbon-degrading bacteria as potential indicators of coral adaptation in hypersaline, thermally variable, and oil-exposed Gulf reefs.
format Artículo científico
id pubmed_41894221
institution PubMed
language en
publishDate 2026
publisher Integrative and comparative biology
record_format pubmed
spellingShingle Seasonal and Depth-Driven Shifts in Coral-Associated Microbial Communities Under Extreme Environmental Conditions in the Persian Gulf.
Asadi Gharabaghi, Sara
Ben Hamadou, Radhouan
Flot, Jean-François
Beji, Marwa
Shokri, Mohammad Reza
Anthozoa
Animals
Seasons
Microbiota
RNA, Ribosomal, 16S
Coral Reefs
Indian Ocean
Archaea
Extreme Environments
Bacteria
Iran
Qatar
Seasonal and Depth-Driven Shifts in Coral-Associated Microbial Communities Under Extreme Environmental Conditions in the Persian Gulf. Asadi Gharabaghi, Sara Ben Hamadou, Radhouan Flot, Jean-François Beji, Marwa Shokri, Mohammad Reza Anthozoa Animals Seasons Microbiota RNA, Ribosomal, 16S Coral Reefs Indian Ocean Archaea Extreme Environments Bacteria Iran Qatar Coral-associated microbial communities are vital to coral resilience under environmental stress. We characterized the microbiomes of five scleractinian species-Porites harrisoni, Platygyra daedalea, Pavona decussata, Acropora downingi, and Acropora microphthalma-from northern (Kish, Iran) and southern (Sheraoh, Qatar) Persian Gulf reefs using full-length 16S rRNA sequencing. Sampling across seasons (winter and summer) and depths (shallow: 4-5 m; deep: 10-18 m) enabled comparison of diversity and reference-based taxonomic composition. A total of 3,984 unique taxonomic units were resolved using a full-length alignment-based approach (Emu). Microbial taxon richness was higher in deep reefs (Kish: 1,900; Sheraoh: 1,800) compared to shallow sites (∼1,300), with overall seasonal declines observed. Microbiomes comprised bacteria (70.9%), dominated by Pseudomonadota (62.4%), and archaea (21.9%) including Halobacteriota, Thermoproteota, Thermoplasmatota, Methanobacteriota, and Candidatus Korarchaeota. Species-specific restructuring included declines in Pseudomonadota for P. harrisoni (from 85.05% to 70.1%) and P. daedalea (from 75.0% to 50.05%), whereas A. downingi exhibited a sharp increase (from 2.0% to 52.3%). Notably, A. microphthalma remained archaea-dominated (>88%) year-round, suggesting potential functional stability under extreme conditions. These results demonstrate that depth, season, and host species shape microbial assemblages and highlight archaeal lineages and hydrocarbon-degrading bacteria as potential indicators of coral adaptation in hypersaline, thermally variable, and oil-exposed Gulf reefs.
title Seasonal and Depth-Driven Shifts in Coral-Associated Microbial Communities Under Extreme Environmental Conditions in the Persian Gulf.
topic Anthozoa
Animals
Seasons
Microbiota
RNA, Ribosomal, 16S
Coral Reefs
Indian Ocean
Archaea
Extreme Environments
Bacteria
Iran
Qatar
url https://pubmed.ncbi.nlm.nih.gov/41894221/