Stable bioreactor control reveals acidic pH-driven metabolic reprogramming and mitochondrial dysfunction in human lymphoblastoid cells.

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Main Authors: Alsolami, Samhan, Zhang, Yingzi, Singh, Upendra, Jin, Yiqing, Steiner, Nadia, Szczepski, Kacper, Klein, Shannon G, Yuan, Baolei, Bi, Chongwei, Wang, Mengge, Fu, Siyi, Izpisua Belmonte, Juan Carlos, Magistretti, Pierre J, Duarte, Carlos M, Jaremko, Lukasz, Li, Mo
Format: Artículo científico
Language:en
Published: Communications biology 2026
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author Alsolami, Samhan
Zhang, Yingzi
Singh, Upendra
Jin, Yiqing
Steiner, Nadia
Szczepski, Kacper
Klein, Shannon G
Yuan, Baolei
Bi, Chongwei
Wang, Mengge
Fu, Siyi
Izpisua Belmonte, Juan Carlos
Magistretti, Pierre J
Duarte, Carlos M
Jaremko, Lukasz
Li, Mo
author_facet Alsolami, Samhan
Zhang, Yingzi
Singh, Upendra
Jin, Yiqing
Steiner, Nadia
Szczepski, Kacper
Klein, Shannon G
Yuan, Baolei
Bi, Chongwei
Wang, Mengge
Fu, Siyi
Izpisua Belmonte, Juan Carlos
Magistretti, Pierre J
Duarte, Carlos M
Jaremko, Lukasz
Li, Mo
Alsolami, Samhan
Zhang, Yingzi
Singh, Upendra
Jin, Yiqing
Steiner, Nadia
Szczepski, Kacper
Klein, Shannon G
Yuan, Baolei
Bi, Chongwei
Wang, Mengge
Fu, Siyi
Izpisua Belmonte, Juan Carlos
Magistretti, Pierre J
Duarte, Carlos M
Jaremko, Lukasz
Li, Mo
collection PubMed - marine biology
contents Stable bioreactor control reveals acidic pH-driven metabolic reprogramming and mitochondrial dysfunction in human lymphoblastoid cells. Alsolami, Samhan Zhang, Yingzi Singh, Upendra Jin, Yiqing Steiner, Nadia Szczepski, Kacper Klein, Shannon G Yuan, Baolei Bi, Chongwei Wang, Mengge Fu, Siyi Izpisua Belmonte, Juan Carlos Magistretti, Pierre J Duarte, Carlos M Jaremko, Lukasz Li, Mo Human cells require pH regulation to maintain physiological function, yet the molecular consequences of acidic environments remain incompletely understood. Here, we employ a gas-only bioreactor to control pH, oxygen, and temperature. Integrated multi-omics analyses reveal that acidic pH induces a glycolytic metabolic shift, suppresses proliferation, and promotes accumulation of lactate and oncometabolites alongside mitochondrial dysfunction. Acidic conditions increase reactive oxygen species (ROS) and activate inflammatory and immune pathways, leading to heteroplasmic enrichment of a pathogenic mitochondrial mutation. Acidic pH depletes intracellular NAD⁺, partly driven by PARP1 activation. Restoring NAD⁺ through nicotinamide mononucleotide (NMN) supplementation partially rescues proliferation and stress-associated transcription, while elevating NAD levels by NMN or PARP1 inhibition reverses heteroplasmic enrichment of mutant mitochondrial DNA. These findings underscore the role of pH homeostasis in coordinating metabolism, redox balance, and immune signaling, and identify NAD⁺ metabolism as a mechanistic link between acidic microenvironments, mitochondrial genome instability, and immune-metabolic remodeling.
format Artículo científico
id pubmed_41986597
institution PubMed
language en
publishDate 2026
publisher Communications biology
record_format pubmed
spellingShingle Stable bioreactor control reveals acidic pH-driven metabolic reprogramming and mitochondrial dysfunction in human lymphoblastoid cells.
Alsolami, Samhan
Zhang, Yingzi
Singh, Upendra
Jin, Yiqing
Steiner, Nadia
Szczepski, Kacper
Klein, Shannon G
Yuan, Baolei
Bi, Chongwei
Wang, Mengge
Fu, Siyi
Izpisua Belmonte, Juan Carlos
Magistretti, Pierre J
Duarte, Carlos M
Jaremko, Lukasz
Li, Mo
Stable bioreactor control reveals acidic pH-driven metabolic reprogramming and mitochondrial dysfunction in human lymphoblastoid cells. Alsolami, Samhan Zhang, Yingzi Singh, Upendra Jin, Yiqing Steiner, Nadia Szczepski, Kacper Klein, Shannon G Yuan, Baolei Bi, Chongwei Wang, Mengge Fu, Siyi Izpisua Belmonte, Juan Carlos Magistretti, Pierre J Duarte, Carlos M Jaremko, Lukasz Li, Mo Human cells require pH regulation to maintain physiological function, yet the molecular consequences of acidic environments remain incompletely understood. Here, we employ a gas-only bioreactor to control pH, oxygen, and temperature. Integrated multi-omics analyses reveal that acidic pH induces a glycolytic metabolic shift, suppresses proliferation, and promotes accumulation of lactate and oncometabolites alongside mitochondrial dysfunction. Acidic conditions increase reactive oxygen species (ROS) and activate inflammatory and immune pathways, leading to heteroplasmic enrichment of a pathogenic mitochondrial mutation. Acidic pH depletes intracellular NAD⁺, partly driven by PARP1 activation. Restoring NAD⁺ through nicotinamide mononucleotide (NMN) supplementation partially rescues proliferation and stress-associated transcription, while elevating NAD levels by NMN or PARP1 inhibition reverses heteroplasmic enrichment of mutant mitochondrial DNA. These findings underscore the role of pH homeostasis in coordinating metabolism, redox balance, and immune signaling, and identify NAD⁺ metabolism as a mechanistic link between acidic microenvironments, mitochondrial genome instability, and immune-metabolic remodeling.
title Stable bioreactor control reveals acidic pH-driven metabolic reprogramming and mitochondrial dysfunction in human lymphoblastoid cells.
url https://pubmed.ncbi.nlm.nih.gov/41986597/