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Main Authors:	Mikryukov, Vladimir, Dulya, Olesya, Abarenkov, Kessy, Anslan, Sten, Hagh-Doust, Niloufar, Prins, Victoria, Panksep, Kristel, Põlme, Sergei, Ibrahim, Khalid S, Bahram, Mo, Adamson, Kalev, Agan, Ahto, Ahmed, Talaat, Alatalo, Juha M, Albornoz, Felipe E, Al-Hatmi, Abdullah Ms, Alkahtani, Saad, Alvarez-Manjarrez, Julieta, Ankuda, Jelena, Antonelli, Alexandre, Ariyan, Manikandan, Armolaitis, Kęstutis, Aslani, Farzad, Barrio, Isabel C, Bauters, Marijn, Biersma, Elisabeth Machteld, Bitenieks, Krišs, Bonito, Gregory, Brearley, Francis Q, Bråthen, Kari Anne, Buegger, Franz, Butterbach-Bahl, Klaus, Bálint, Miklós, Cameron, Erin K, Canini, Fabiana, Casique-Valdés, Rebeca, Corrales, Adriana, Davydov, Evgeny A, De Crop, Eske, De Kesel, André, Djeugap, Joseph Fovo, Drenkhan, Rein, Duarte Ritter, Camila, Dudov, Sergey V, Espenberg, Mikk, Fanuel, Ongua, Fedosov, Vladimir E, Florence, Luke, Furneaux, Brendan R, Furtado, Ariadne N M, Färkkilä, Sanni, Gamova, Natalia S, Garibay-Orijel, Roberto, Geml, József, Ghosh, Soumya, Godoy, Roberto, Gohar, Daniyal, Gryzenhout, Marieka, Hasan, Ayad H, Hashem, Amr H, Heilmann-Clausen, Jacob, Henkel, Terry W, Hiiesalu, Indrek, Hiiesalu, Inga, Hosseyni Moghaddam, Mahdieh S, Hyde, Kevin D, Inostroza, Karina, Kariman, Khalil, Karimullina, Elina, Kepfer-Rojas, Sebastian, Khalid, Abdul Nasir, Klavina, Darta, Kohout, Petr, Korotkov, Yuri N, Kupagme, John Y, Kurina, Olavi, Lamit, Louis James, Lateef, Adebola Azeez, Ledoux, Njouonkou André, Lim, Young Woon, Maciá-Vicente, Jose G, Makovskis, Kristaps, Martínez, Sebastián, Marín, César, Meidl, Peter, Mortimer, Peter E, Mundra, Sunil, Naluyange, Victoria, Netherway, Tarquin, Newsham, Kevin K, Nouhra, Eduardo, Nyamukondiwa, Casper, Nteziryayo, Vincent, Ochieno, Dennis M W, Oja, Jane, Onipchenko, Vladimir G, Otsing, Eveli, Owaid, Mustafa Nadhim, Piepenbring, Meike, Pochekutova, Polina, Pombo, Maihyra Marina, Pritsch, Karin, Puusepp, Rasmus, Pärn, Jaan, Põldmaa, Kadri, Rahimlou, Saleh, Rinaldi, Andrea C, Rojas, Oscar, Roslin, Tomas, Runnel, Kadri, Rähn, Elisabeth, Saba, Malka, Saitta, Alessandro, Salih, Talal Sabhan, Sarapuu, Joosep, Serrano, Eduard, Serrano, Oscar, Sharmah, Dipon, Sharp, Cathy, Skalska-Tuomi, Maria W, Tchan, Kassim Issifou, Truong, Camille, van der Merwe, Helga, Vanié-Léabo, Linda L P, Vasco-Palacios, Aida M, Verbeken, Annemieke, Vlk, Lukáš, Wijayawardene, Nalin N, Wood, Jennifer L, Yasanthika, W A Erandi, Yorou, Nourou S, Zahn, Geoffrey, Zettur, Irma, Zucconi, Laura, Kõljalg, Urmas, Tedersoo, Leho
Format:	Artículo científico
Language:	en
Published:	Scientific data 2026
Online Access:	https://pubmed.ncbi.nlm.nih.gov/42086586/
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_version_	1868266051130621952
author	Mikryukov, Vladimir Dulya, Olesya Abarenkov, Kessy Anslan, Sten Hagh-Doust, Niloufar Prins, Victoria Panksep, Kristel Põlme, Sergei Ibrahim, Khalid S Bahram, Mo Adamson, Kalev Agan, Ahto Ahmed, Talaat Alatalo, Juha M Albornoz, Felipe E Al-Hatmi, Abdullah Ms Alkahtani, Saad Alvarez-Manjarrez, Julieta Ankuda, Jelena Antonelli, Alexandre Ariyan, Manikandan Armolaitis, Kęstutis Aslani, Farzad Barrio, Isabel C Bauters, Marijn Biersma, Elisabeth Machteld Bitenieks, Krišs Bonito, Gregory Brearley, Francis Q Bråthen, Kari Anne Buegger, Franz Butterbach-Bahl, Klaus Bálint, Miklós Cameron, Erin K Canini, Fabiana Casique-Valdés, Rebeca Corrales, Adriana Davydov, Evgeny A De Crop, Eske De Kesel, André Djeugap, Joseph Fovo Drenkhan, Rein Duarte Ritter, Camila Dudov, Sergey V Espenberg, Mikk Fanuel, Ongua Fedosov, Vladimir E Florence, Luke Furneaux, Brendan R Furtado, Ariadne N M Färkkilä, Sanni Gamova, Natalia S Garibay-Orijel, Roberto Geml, József Ghosh, Soumya Godoy, Roberto Gohar, Daniyal Gryzenhout, Marieka Hasan, Ayad H Hashem, Amr H Heilmann-Clausen, Jacob Henkel, Terry W Hiiesalu, Indrek Hiiesalu, Inga Hosseyni Moghaddam, Mahdieh S Hyde, Kevin D Inostroza, Karina Kariman, Khalil Karimullina, Elina Kepfer-Rojas, Sebastian Khalid, Abdul Nasir Klavina, Darta Kohout, Petr Korotkov, Yuri N Kupagme, John Y Kurina, Olavi Lamit, Louis James Lateef, Adebola Azeez Ledoux, Njouonkou André Lim, Young Woon Maciá-Vicente, Jose G Makovskis, Kristaps Martínez, Sebastián Marín, César Meidl, Peter Mortimer, Peter E Mundra, Sunil Naluyange, Victoria Netherway, Tarquin Newsham, Kevin K Nouhra, Eduardo Nyamukondiwa, Casper Nteziryayo, Vincent Ochieno, Dennis M W Oja, Jane Onipchenko, Vladimir G Otsing, Eveli Owaid, Mustafa Nadhim Piepenbring, Meike Pochekutova, Polina Pombo, Maihyra Marina Pritsch, Karin Puusepp, Rasmus Pärn, Jaan Põldmaa, Kadri Rahimlou, Saleh Rinaldi, Andrea C Rojas, Oscar Roslin, Tomas Runnel, Kadri Rähn, Elisabeth Saba, Malka Saitta, Alessandro Salih, Talal Sabhan Sarapuu, Joosep Serrano, Eduard Serrano, Oscar Sharmah, Dipon Sharp, Cathy Skalska-Tuomi, Maria W Tchan, Kassim Issifou Truong, Camille van der Merwe, Helga Vanié-Léabo, Linda L P Vasco-Palacios, Aida M Verbeken, Annemieke Vlk, Lukáš Wijayawardene, Nalin N Wood, Jennifer L Yasanthika, W A Erandi Yorou, Nourou S Zahn, Geoffrey Zettur, Irma Zucconi, Laura Kõljalg, Urmas Tedersoo, Leho
author_facet	Mikryukov, Vladimir Dulya, Olesya Abarenkov, Kessy Anslan, Sten Hagh-Doust, Niloufar Prins, Victoria Panksep, Kristel Põlme, Sergei Ibrahim, Khalid S Bahram, Mo Adamson, Kalev Agan, Ahto Ahmed, Talaat Alatalo, Juha M Albornoz, Felipe E Al-Hatmi, Abdullah Ms Alkahtani, Saad Alvarez-Manjarrez, Julieta Ankuda, Jelena Antonelli, Alexandre Ariyan, Manikandan Armolaitis, Kęstutis Aslani, Farzad Barrio, Isabel C Bauters, Marijn Biersma, Elisabeth Machteld Bitenieks, Krišs Bonito, Gregory Brearley, Francis Q Bråthen, Kari Anne Buegger, Franz Butterbach-Bahl, Klaus Bálint, Miklós Cameron, Erin K Canini, Fabiana Casique-Valdés, Rebeca Corrales, Adriana Davydov, Evgeny A De Crop, Eske De Kesel, André Djeugap, Joseph Fovo Drenkhan, Rein Duarte Ritter, Camila Dudov, Sergey V Espenberg, Mikk Fanuel, Ongua Fedosov, Vladimir E Florence, Luke Furneaux, Brendan R Furtado, Ariadne N M Färkkilä, Sanni Gamova, Natalia S Garibay-Orijel, Roberto Geml, József Ghosh, Soumya Godoy, Roberto Gohar, Daniyal Gryzenhout, Marieka Hasan, Ayad H Hashem, Amr H Heilmann-Clausen, Jacob Henkel, Terry W Hiiesalu, Indrek Hiiesalu, Inga Hosseyni Moghaddam, Mahdieh S Hyde, Kevin D Inostroza, Karina Kariman, Khalil Karimullina, Elina Kepfer-Rojas, Sebastian Khalid, Abdul Nasir Klavina, Darta Kohout, Petr Korotkov, Yuri N Kupagme, John Y Kurina, Olavi Lamit, Louis James Lateef, Adebola Azeez Ledoux, Njouonkou André Lim, Young Woon Maciá-Vicente, Jose G Makovskis, Kristaps Martínez, Sebastián Marín, César Meidl, Peter Mortimer, Peter E Mundra, Sunil Naluyange, Victoria Netherway, Tarquin Newsham, Kevin K Nouhra, Eduardo Nyamukondiwa, Casper Nteziryayo, Vincent Ochieno, Dennis M W Oja, Jane Onipchenko, Vladimir G Otsing, Eveli Owaid, Mustafa Nadhim Piepenbring, Meike Pochekutova, Polina Pombo, Maihyra Marina Pritsch, Karin Puusepp, Rasmus Pärn, Jaan Põldmaa, Kadri Rahimlou, Saleh Rinaldi, Andrea C Rojas, Oscar Roslin, Tomas Runnel, Kadri Rähn, Elisabeth Saba, Malka Saitta, Alessandro Salih, Talal Sabhan Sarapuu, Joosep Serrano, Eduard Serrano, Oscar Sharmah, Dipon Sharp, Cathy Skalska-Tuomi, Maria W Tchan, Kassim Issifou Truong, Camille van der Merwe, Helga Vanié-Léabo, Linda L P Vasco-Palacios, Aida M Verbeken, Annemieke Vlk, Lukáš Wijayawardene, Nalin N Wood, Jennifer L Yasanthika, W A Erandi Yorou, Nourou S Zahn, Geoffrey Zettur, Irma Zucconi, Laura Kõljalg, Urmas Tedersoo, Leho Mikryukov, Vladimir Dulya, Olesya Abarenkov, Kessy Anslan, Sten Hagh-Doust, Niloufar Prins, Victoria Panksep, Kristel Põlme, Sergei Ibrahim, Khalid S Bahram, Mo Adamson, Kalev Agan, Ahto Ahmed, Talaat Alatalo, Juha M Albornoz, Felipe E Al-Hatmi, Abdullah Ms Alkahtani, Saad Alvarez-Manjarrez, Julieta Ankuda, Jelena Antonelli, Alexandre Ariyan, Manikandan Armolaitis, Kęstutis Aslani, Farzad Barrio, Isabel C Bauters, Marijn Biersma, Elisabeth Machteld Bitenieks, Krišs Bonito, Gregory Brearley, Francis Q Bråthen, Kari Anne Buegger, Franz Butterbach-Bahl, Klaus Bálint, Miklós Cameron, Erin K Canini, Fabiana Casique-Valdés, Rebeca Corrales, Adriana Davydov, Evgeny A De Crop, Eske De Kesel, André Djeugap, Joseph Fovo Drenkhan, Rein Duarte Ritter, Camila Dudov, Sergey V Espenberg, Mikk Fanuel, Ongua Fedosov, Vladimir E Florence, Luke Furneaux, Brendan R Furtado, Ariadne N M Färkkilä, Sanni Gamova, Natalia S Garibay-Orijel, Roberto Geml, József Ghosh, Soumya Godoy, Roberto Gohar, Daniyal Gryzenhout, Marieka Hasan, Ayad H Hashem, Amr H Heilmann-Clausen, Jacob Henkel, Terry W Hiiesalu, Indrek Hiiesalu, Inga Hosseyni Moghaddam, Mahdieh S Hyde, Kevin D Inostroza, Karina Kariman, Khalil Karimullina, Elina Kepfer-Rojas, Sebastian Khalid, Abdul Nasir Klavina, Darta Kohout, Petr Korotkov, Yuri N Kupagme, John Y Kurina, Olavi Lamit, Louis James Lateef, Adebola Azeez Ledoux, Njouonkou André Lim, Young Woon Maciá-Vicente, Jose G Makovskis, Kristaps Martínez, Sebastián Marín, César Meidl, Peter Mortimer, Peter E Mundra, Sunil Naluyange, Victoria Netherway, Tarquin Newsham, Kevin K Nouhra, Eduardo Nyamukondiwa, Casper Nteziryayo, Vincent Ochieno, Dennis M W Oja, Jane Onipchenko, Vladimir G Otsing, Eveli Owaid, Mustafa Nadhim Piepenbring, Meike Pochekutova, Polina Pombo, Maihyra Marina Pritsch, Karin Puusepp, Rasmus Pärn, Jaan Põldmaa, Kadri Rahimlou, Saleh Rinaldi, Andrea C Rojas, Oscar Roslin, Tomas Runnel, Kadri Rähn, Elisabeth Saba, Malka Saitta, Alessandro Salih, Talal Sabhan Sarapuu, Joosep Serrano, Eduard Serrano, Oscar Sharmah, Dipon Sharp, Cathy Skalska-Tuomi, Maria W Tchan, Kassim Issifou Truong, Camille van der Merwe, Helga Vanié-Léabo, Linda L P Vasco-Palacios, Aida M Verbeken, Annemieke Vlk, Lukáš Wijayawardene, Nalin N Wood, Jennifer L Yasanthika, W A Erandi Yorou, Nourou S Zahn, Geoffrey Zettur, Irma Zucconi, Laura Kõljalg, Urmas Tedersoo, Leho
collection	PubMed - marine biology
contents	Global dataset of soil eukaryotic communities created with a uniform protocol and long read sequencing. Mikryukov, Vladimir Dulya, Olesya Abarenkov, Kessy Anslan, Sten Hagh-Doust, Niloufar Prins, Victoria Panksep, Kristel Põlme, Sergei Ibrahim, Khalid S Bahram, Mo Adamson, Kalev Agan, Ahto Ahmed, Talaat Alatalo, Juha M Albornoz, Felipe E Al-Hatmi, Abdullah Ms Alkahtani, Saad Alvarez-Manjarrez, Julieta Ankuda, Jelena Antonelli, Alexandre Ariyan, Manikandan Armolaitis, Kęstutis Aslani, Farzad Barrio, Isabel C Bauters, Marijn Biersma, Elisabeth Machteld Bitenieks, Krišs Bonito, Gregory Brearley, Francis Q Bråthen, Kari Anne Buegger, Franz Butterbach-Bahl, Klaus Bálint, Miklós Cameron, Erin K Canini, Fabiana Casique-Valdés, Rebeca Corrales, Adriana Davydov, Evgeny A De Crop, Eske De Kesel, André Djeugap, Joseph Fovo Drenkhan, Rein Duarte Ritter, Camila Dudov, Sergey V Espenberg, Mikk Fanuel, Ongua Fedosov, Vladimir E Florence, Luke Furneaux, Brendan R Furtado, Ariadne N M Färkkilä, Sanni Gamova, Natalia S Garibay-Orijel, Roberto Geml, József Ghosh, Soumya Godoy, Roberto Gohar, Daniyal Gryzenhout, Marieka Hasan, Ayad H Hashem, Amr H Heilmann-Clausen, Jacob Henkel, Terry W Hiiesalu, Indrek Hiiesalu, Inga Hosseyni Moghaddam, Mahdieh S Hyde, Kevin D Inostroza, Karina Kariman, Khalil Karimullina, Elina Kepfer-Rojas, Sebastian Khalid, Abdul Nasir Klavina, Darta Kohout, Petr Korotkov, Yuri N Kupagme, John Y Kurina, Olavi Lamit, Louis James Lateef, Adebola Azeez Ledoux, Njouonkou André Lim, Young Woon Maciá-Vicente, Jose G Makovskis, Kristaps Martínez, Sebastián Marín, César Meidl, Peter Mortimer, Peter E Mundra, Sunil Naluyange, Victoria Netherway, Tarquin Newsham, Kevin K Nouhra, Eduardo Nyamukondiwa, Casper Nteziryayo, Vincent Ochieno, Dennis M W Oja, Jane Onipchenko, Vladimir G Otsing, Eveli Owaid, Mustafa Nadhim Piepenbring, Meike Pochekutova, Polina Pombo, Maihyra Marina Pritsch, Karin Puusepp, Rasmus Pärn, Jaan Põldmaa, Kadri Rahimlou, Saleh Rinaldi, Andrea C Rojas, Oscar Roslin, Tomas Runnel, Kadri Rähn, Elisabeth Saba, Malka Saitta, Alessandro Salih, Talal Sabhan Sarapuu, Joosep Serrano, Eduard Serrano, Oscar Sharmah, Dipon Sharp, Cathy Skalska-Tuomi, Maria W Tchan, Kassim Issifou Truong, Camille van der Merwe, Helga Vanié-Léabo, Linda L P Vasco-Palacios, Aida M Verbeken, Annemieke Vlk, Lukáš Wijayawardene, Nalin N Wood, Jennifer L Yasanthika, W A Erandi Yorou, Nourou S Zahn, Geoffrey Zettur, Irma Zucconi, Laura Kõljalg, Urmas Tedersoo, Leho Soil eukaryotes, including fungi, protists, plants, and animals, are central to biosphere functioning and resilience. The Global Standardised Soil Eukaryome Dataset (GloSED) is the first dataset encompassing the entire spectrum of soil eukaryotes, covering 4,063 sampling sites in 121 countries on all continents, revealing nearly one million operational taxonomic units. All samples were collected and analysed using a standardised protocol minimizing technical biases. Long-read sequencing of full-length ITS and 18S-V9 regions provide broad taxonomic coverage and high-resolution identification supported by specialist curation of "dark taxa". A rigorous bioinformatic processing ensures against homopolymer errors, PCR-mediated chimeras, and index switching providing high data quality. The dataset is supported by raw sequences and an open-source containerised workflow for reproducible analyses. The samples are accompanied by land-cover description and directly measured soil pH, δC, δN, as well as P, K, Ca, Mg, and total C and N contents. GloSED is the first database that enables ecological and biogeographic studies of entire soil eukaryotic communities from local to global scales.
format	Artículo científico
id	pubmed_42086586
institution	PubMed
language	en
publishDate	2026
publisher	Scientific data
record_format	pubmed
spellingShingle	Global dataset of soil eukaryotic communities created with a uniform protocol and long read sequencing. Mikryukov, Vladimir Dulya, Olesya Abarenkov, Kessy Anslan, Sten Hagh-Doust, Niloufar Prins, Victoria Panksep, Kristel Põlme, Sergei Ibrahim, Khalid S Bahram, Mo Adamson, Kalev Agan, Ahto Ahmed, Talaat Alatalo, Juha M Albornoz, Felipe E Al-Hatmi, Abdullah Ms Alkahtani, Saad Alvarez-Manjarrez, Julieta Ankuda, Jelena Antonelli, Alexandre Ariyan, Manikandan Armolaitis, Kęstutis Aslani, Farzad Barrio, Isabel C Bauters, Marijn Biersma, Elisabeth Machteld Bitenieks, Krišs Bonito, Gregory Brearley, Francis Q Bråthen, Kari Anne Buegger, Franz Butterbach-Bahl, Klaus Bálint, Miklós Cameron, Erin K Canini, Fabiana Casique-Valdés, Rebeca Corrales, Adriana Davydov, Evgeny A De Crop, Eske De Kesel, André Djeugap, Joseph Fovo Drenkhan, Rein Duarte Ritter, Camila Dudov, Sergey V Espenberg, Mikk Fanuel, Ongua Fedosov, Vladimir E Florence, Luke Furneaux, Brendan R Furtado, Ariadne N M Färkkilä, Sanni Gamova, Natalia S Garibay-Orijel, Roberto Geml, József Ghosh, Soumya Godoy, Roberto Gohar, Daniyal Gryzenhout, Marieka Hasan, Ayad H Hashem, Amr H Heilmann-Clausen, Jacob Henkel, Terry W Hiiesalu, Indrek Hiiesalu, Inga Hosseyni Moghaddam, Mahdieh S Hyde, Kevin D Inostroza, Karina Kariman, Khalil Karimullina, Elina Kepfer-Rojas, Sebastian Khalid, Abdul Nasir Klavina, Darta Kohout, Petr Korotkov, Yuri N Kupagme, John Y Kurina, Olavi Lamit, Louis James Lateef, Adebola Azeez Ledoux, Njouonkou André Lim, Young Woon Maciá-Vicente, Jose G Makovskis, Kristaps Martínez, Sebastián Marín, César Meidl, Peter Mortimer, Peter E Mundra, Sunil Naluyange, Victoria Netherway, Tarquin Newsham, Kevin K Nouhra, Eduardo Nyamukondiwa, Casper Nteziryayo, Vincent Ochieno, Dennis M W Oja, Jane Onipchenko, Vladimir G Otsing, Eveli Owaid, Mustafa Nadhim Piepenbring, Meike Pochekutova, Polina Pombo, Maihyra Marina Pritsch, Karin Puusepp, Rasmus Pärn, Jaan Põldmaa, Kadri Rahimlou, Saleh Rinaldi, Andrea C Rojas, Oscar Roslin, Tomas Runnel, Kadri Rähn, Elisabeth Saba, Malka Saitta, Alessandro Salih, Talal Sabhan Sarapuu, Joosep Serrano, Eduard Serrano, Oscar Sharmah, Dipon Sharp, Cathy Skalska-Tuomi, Maria W Tchan, Kassim Issifou Truong, Camille van der Merwe, Helga Vanié-Léabo, Linda L P Vasco-Palacios, Aida M Verbeken, Annemieke Vlk, Lukáš Wijayawardene, Nalin N Wood, Jennifer L Yasanthika, W A Erandi Yorou, Nourou S Zahn, Geoffrey Zettur, Irma Zucconi, Laura Kõljalg, Urmas Tedersoo, Leho Global dataset of soil eukaryotic communities created with a uniform protocol and long read sequencing. Mikryukov, Vladimir Dulya, Olesya Abarenkov, Kessy Anslan, Sten Hagh-Doust, Niloufar Prins, Victoria Panksep, Kristel Põlme, Sergei Ibrahim, Khalid S Bahram, Mo Adamson, Kalev Agan, Ahto Ahmed, Talaat Alatalo, Juha M Albornoz, Felipe E Al-Hatmi, Abdullah Ms Alkahtani, Saad Alvarez-Manjarrez, Julieta Ankuda, Jelena Antonelli, Alexandre Ariyan, Manikandan Armolaitis, Kęstutis Aslani, Farzad Barrio, Isabel C Bauters, Marijn Biersma, Elisabeth Machteld Bitenieks, Krišs Bonito, Gregory Brearley, Francis Q Bråthen, Kari Anne Buegger, Franz Butterbach-Bahl, Klaus Bálint, Miklós Cameron, Erin K Canini, Fabiana Casique-Valdés, Rebeca Corrales, Adriana Davydov, Evgeny A De Crop, Eske De Kesel, André Djeugap, Joseph Fovo Drenkhan, Rein Duarte Ritter, Camila Dudov, Sergey V Espenberg, Mikk Fanuel, Ongua Fedosov, Vladimir E Florence, Luke Furneaux, Brendan R Furtado, Ariadne N M Färkkilä, Sanni Gamova, Natalia S Garibay-Orijel, Roberto Geml, József Ghosh, Soumya Godoy, Roberto Gohar, Daniyal Gryzenhout, Marieka Hasan, Ayad H Hashem, Amr H Heilmann-Clausen, Jacob Henkel, Terry W Hiiesalu, Indrek Hiiesalu, Inga Hosseyni Moghaddam, Mahdieh S Hyde, Kevin D Inostroza, Karina Kariman, Khalil Karimullina, Elina Kepfer-Rojas, Sebastian Khalid, Abdul Nasir Klavina, Darta Kohout, Petr Korotkov, Yuri N Kupagme, John Y Kurina, Olavi Lamit, Louis James Lateef, Adebola Azeez Ledoux, Njouonkou André Lim, Young Woon Maciá-Vicente, Jose G Makovskis, Kristaps Martínez, Sebastián Marín, César Meidl, Peter Mortimer, Peter E Mundra, Sunil Naluyange, Victoria Netherway, Tarquin Newsham, Kevin K Nouhra, Eduardo Nyamukondiwa, Casper Nteziryayo, Vincent Ochieno, Dennis M W Oja, Jane Onipchenko, Vladimir G Otsing, Eveli Owaid, Mustafa Nadhim Piepenbring, Meike Pochekutova, Polina Pombo, Maihyra Marina Pritsch, Karin Puusepp, Rasmus Pärn, Jaan Põldmaa, Kadri Rahimlou, Saleh Rinaldi, Andrea C Rojas, Oscar Roslin, Tomas Runnel, Kadri Rähn, Elisabeth Saba, Malka Saitta, Alessandro Salih, Talal Sabhan Sarapuu, Joosep Serrano, Eduard Serrano, Oscar Sharmah, Dipon Sharp, Cathy Skalska-Tuomi, Maria W Tchan, Kassim Issifou Truong, Camille van der Merwe, Helga Vanié-Léabo, Linda L P Vasco-Palacios, Aida M Verbeken, Annemieke Vlk, Lukáš Wijayawardene, Nalin N Wood, Jennifer L Yasanthika, W A Erandi Yorou, Nourou S Zahn, Geoffrey Zettur, Irma Zucconi, Laura Kõljalg, Urmas Tedersoo, Leho Soil eukaryotes, including fungi, protists, plants, and animals, are central to biosphere functioning and resilience. The Global Standardised Soil Eukaryome Dataset (GloSED) is the first dataset encompassing the entire spectrum of soil eukaryotes, covering 4,063 sampling sites in 121 countries on all continents, revealing nearly one million operational taxonomic units. All samples were collected and analysed using a standardised protocol minimizing technical biases. Long-read sequencing of full-length ITS and 18S-V9 regions provide broad taxonomic coverage and high-resolution identification supported by specialist curation of "dark taxa". A rigorous bioinformatic processing ensures against homopolymer errors, PCR-mediated chimeras, and index switching providing high data quality. The dataset is supported by raw sequences and an open-source containerised workflow for reproducible analyses. The samples are accompanied by land-cover description and directly measured soil pH, δC, δN, as well as P, K, Ca, Mg, and total C and N contents. GloSED is the first database that enables ecological and biogeographic studies of entire soil eukaryotic communities from local to global scales.
title	Global dataset of soil eukaryotic communities created with a uniform protocol and long read sequencing.
url	https://pubmed.ncbi.nlm.nih.gov/42086586/

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