HybSuite: An integrated pipeline for hybrid capture phylogenomics from reads to trees
Fuente:
Wiley Open Access
Saved in:
| Main Authors: | Yu‐Xuan Liu, Zi‐Jia Lu, Wyckliffe Omondi Omollo, Meng‐Meng Wang, Li‐Guo Zhang, Tao Xiong, Xue‐Qin Wang, Yi‐Ying Wang, Miao Sun |
|---|---|
| Format: | Artículo Open Access |
| Published: |
Wiley
2026
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Developing Asparagaceae1726: An Asparagaceae‐specific probe set targeting 1726 loci for Hyb‐Seq and phylogenomics in the family
by: Philip C. Bentz, et al.
Published: (2024)
by: Philip C. Bentz, et al.
Published: (2024)
From phylogenomics to breeding: Can universal target capture probes be used in the development of SNP markers for kinship analysis?
by: Kedra M. Ousmael, et al.
Published: (2024)
by: Kedra M. Ousmael, et al.
Published: (2024)
Truly the best of both worlds: Merging lineage‐specific and universal probe kits to maximize phylogenomic inference
by: Luiz Henrique M. Fonseca, et al.
Published: (2024)
by: Luiz Henrique M. Fonseca, et al.
Published: (2024)
Advancing phylogenomics in Amaranthaceae sensu stricto: Development and application of a new nuclear target enrichment bait set
by: Tina Kiedaisch, et al.
Published: (2025)
by: Tina Kiedaisch, et al.
Published: (2025)
Compositae‐ParaLoss‐1272: A complementary sunflower‐specific probe set reduces paralogs in phylogenomic analyses of complex systems
by: Erika R. Moore‐Pollard, et al.
Published: (2024)
by: Erika R. Moore‐Pollard, et al.
Published: (2024)
PlantSAM: An object detection‐driven segmentation pipeline for herbarium specimens
by: Youcef Sklab, et al.
Published: (2025)
by: Youcef Sklab, et al.
Published: (2025)
Orchid fruit and root movement analyzed using 2D photographs and a bioinformatics pipeline for processing sequential 3D scans
by: Dewi Pramanik, et al.
Published: (2024)
by: Dewi Pramanik, et al.
Published: (2024)
CuticleTrace: A toolkit for capturing cell outlines from leaf cuticle with implications for paleoecology and paleoclimatology
by: Benjamin A. Lloyd, et al.
Published: (2024)
by: Benjamin A. Lloyd, et al.
Published: (2024)
A unified framework to investigate and interpret hybrid and allopolyploid biodiversity across biological scales
by: Christopher P. Krieg
Published: (2024)
by: Christopher P. Krieg
Published: (2024)
A novel combination of in vitro propagation and hydroponic culture for hybrid cacao (Theobroma cacao) plants
by: Luis David Vera Pinargote, et al.
Published: (2025)
by: Luis David Vera Pinargote, et al.
Published: (2025)
Expanded application to plant reproductive tissues of a branched DNA probe‐based in situ hybridization method
by: Brooklyn M. Anaya, et al.
Published: (2025)
by: Brooklyn M. Anaya, et al.
Published: (2025)
Conservation Action Tracker: A tool to identify and monitor conservation actions for tree species
by: Itxaso Quintana, et al.
Published: (2024)
by: Itxaso Quintana, et al.
Published: (2024)
Experimental methods for wind tunnel studies of seed dispersal by wind
by: Liang Tian, et al.
Published: (2026)
by: Liang Tian, et al.
Published: (2026)
Animal‐mediated seed dispersal: A review of study methods
by: Noelle G. Beckman, et al.
Published: (2026)
by: Noelle G. Beckman, et al.
Published: (2026)
Plastid and nuclear phylogenomics of Cyphostemma (Vitaceae) provide new insights into genome size evolution across sub‐Saharan Africa
by: Rindra M. Ranaivoson, et al.
Published: (2026)
by: Rindra M. Ranaivoson, et al.
Published: (2026)
mvh: An R tool to assemble and organize virtual herbaria from openly available specimen images
by: Thais Vasconcelos, et al.
Published: (2025)
by: Thais Vasconcelos, et al.
Published: (2025)
A simple and affordable protocol to assess censer seed dispersal: First confirmation of the mechanism in the genus Solanum
by: Abigail J. Motter, et al.
Published: (2026)
by: Abigail J. Motter, et al.
Published: (2026)
A new spin on chemotaxonomy: Using non‐proteogenic amino acids as a test case
by: Makenzie Gibson, et al.
Published: (2025)
by: Makenzie Gibson, et al.
Published: (2025)
Using large language models to extract plant functional traits from unstructured text
by: Viktor Domazetoski, et al.
Published: (2025)
by: Viktor Domazetoski, et al.
Published: (2025)
Hijacking a rapid and scalable metagenomic method reveals subgenome dynamics and evolution in polyploid plants
by: Gillian Reynolds, et al.
Published: (2024)
by: Gillian Reynolds, et al.
Published: (2024)
Chromosome‐scale reference genome of Pectocarya recurvata , the species with the smallest reported genome size in Boraginaceae
by: Poppy C. Northing, et al.
Published: (2025)
by: Poppy C. Northing, et al.
Published: (2025)
Optogenetic control of transgene expression in Marchantia polymorpha
by: Anya Lillemor Lindström Battle, et al.
Published: (2025)
by: Anya Lillemor Lindström Battle, et al.
Published: (2025)
Applying interpretable machine learning to assess intraspecific trait divergence under landscape‐scale population differentiation
by: Sambadi Majumder, et al.
Published: (2025)
by: Sambadi Majumder, et al.
Published: (2025)
expowo: An R package for mining global plant diversity and distribution data
by: Débora C. Zuanny, et al.
Published: (2024)
by: Débora C. Zuanny, et al.
Published: (2024)
Issue Information
Published: (2024)
Published: (2024)
An open‐source LED lamp for use with the LI‐6800 photosynthesis system
by: Aarón I. Vélez‐Ramírez, et al.
Published: (2024)
by: Aarón I. Vélez‐Ramírez, et al.
Published: (2024)
Analysis of plant metabolomics data using identification‐free approaches
by: Xinyu Yuan, et al.
Published: (2025)
by: Xinyu Yuan, et al.
Published: (2025)
Charting the course for new discoveries in polyploid lineages
by: Michael R. McKain, et al.
Published: (2024)
by: Michael R. McKain, et al.
Published: (2024)
SkelPy: A graphic user interface–based approach for skeletonizing fungal networks
by: Melanie Madrigal, et al.
Published: (2026)
by: Melanie Madrigal, et al.
Published: (2026)
A practical and easy‐to‐scale protocol for removing chlorophylls from leaf extracts
by: Alice Fossati, et al.
Published: (2025)
by: Alice Fossati, et al.
Published: (2025)
Expression‐based machine learning models for predicting plant tissue identity
by: Sourabh Palande, et al.
Published: (2024)
by: Sourabh Palande, et al.
Published: (2024)
Data‐centric species distribution modeling: Impacts of modeler decisions in a case study of invasive European frog‐bit
by: Sara E. Hansen, et al.
Published: (2024)
by: Sara E. Hansen, et al.
Published: (2024)
A machine learning algorithm for the automatic classification of Phytophthora infestans genotypes into clonal lineages
by: Camilo Patarroyo, et al.
Published: (2024)
by: Camilo Patarroyo, et al.
Published: (2024)
Semi‐automated assessment for NatureServe subnational conservation status ranks for state floras
by: Julia H. Prins, et al.
Published: (2026)
by: Julia H. Prins, et al.
Published: (2026)
Fully automatic extraction of morphological traits from the web: Utopia or reality?
by: Diego Marcos, et al.
Published: (2025)
by: Diego Marcos, et al.
Published: (2025)
Use of electrolyte leakage to assess floral damage after freezing
by: Jessica A. Savage, et al.
Published: (2024)
by: Jessica A. Savage, et al.
Published: (2024)
Enhancing plant morphological trait identification in herbarium collections through deep learning–based segmentation
by: Hanane Ariouat, et al.
Published: (2025)
by: Hanane Ariouat, et al.
Published: (2025)
Astragalean819: An Astragalean clade‐specific bait set to resolve phylogenetic relationships in Astragalus
by: Daniele Buono, et al.
Published: (2025)
by: Daniele Buono, et al.
Published: (2025)
Advances in analyzing and engineering plant metabolic diversity
by: Kira J. Tiedge, et al.
Published: (2025)
by: Kira J. Tiedge, et al.
Published: (2025)
A low‐cost protocol for the optical method of vulnerability curves to calculate P50
by: Georgina González‐Rebeles, et al.
Published: (2025)
by: Georgina González‐Rebeles, et al.
Published: (2025)
Similar Items
-
Developing Asparagaceae1726: An Asparagaceae‐specific probe set targeting 1726 loci for Hyb‐Seq and phylogenomics in the family
by: Philip C. Bentz, et al.
Published: (2024) -
From phylogenomics to breeding: Can universal target capture probes be used in the development of SNP markers for kinship analysis?
by: Kedra M. Ousmael, et al.
Published: (2024) -
Truly the best of both worlds: Merging lineage‐specific and universal probe kits to maximize phylogenomic inference
by: Luiz Henrique M. Fonseca, et al.
Published: (2024) -
Advancing phylogenomics in Amaranthaceae sensu stricto: Development and application of a new nuclear target enrichment bait set
by: Tina Kiedaisch, et al.
Published: (2025) -
Compositae‐ParaLoss‐1272: A complementary sunflower‐specific probe set reduces paralogs in phylogenomic analyses of complex systems
by: Erika R. Moore‐Pollard, et al.
Published: (2024)