Cover Image

AlphaFold2 ‐Guided Cyclic Peptide Stabilizer Design to Target Protein–Protein Interactions

Fuente: Wiley Open Access

Saved in:

Bibliographic Details
Main Authors:	Niklas Halbwedl, Martin Zacharias
Format:	Artículo Open Access
Published:	Wiley 2026
Subjects:	Proteins: Structure, Function, and Bioinformatics
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Improving AlphaFold2 ‐ and AlphaFold3 ‐Based Protein Complex Structure Prediction With MULTICOM4 in CASP16
by: Jian Liu, et al.
Published: (2025)

Protein‐Variant‐Phenotype Study of NBAS Using AlphaFold in the Aspect of SOPH Syndrome
by: Leonid Zhozhikov, et al.
Published: (2024)

Protein Complex Structure Prediction With AlphaFold‐Enhanced HDOCK in CAPRI Rounds 47–55
by: Hao Li, et al.
Published: (2025)

Modeling CAPRI Targets of Round 55 by Combining AlphaFold and Docking
by: Amar Singh, et al.
Published: (2025)

AlphaFold Kinase Optimizer: Enhancing Virtual Screening Performance Through Automated Refinement of AlphaFold ‐Based Kinase Structures
by: Sergei Evteev, et al.
Published: (2025)

Phosphorylation Mechanism Switching in Histidine Kinases Is a Tool for Fast Protein Evolution: Insights From AlphaFold Models
by: Federico A. Olivieri, et al.
Published: (2024)

Biomolecular Interaction Prediction in the Pre‐ and Post‐ AlphaFold Era: The 8th CAPRI Evaluation
by: Marc F. Lensink, et al.
Published: (2025)

AlphaFold and Docking Approaches for Antibody–Antigen and Other Targets: Insights From CAPRI Rounds 47–55
by: Ragul Gowthaman, et al.
Published: (2025)

Application of AlphaFold models in evaluating ligandable cysteines across E3 ligases
by: Patrick Koldenhof, et al.
Published: (2024)

Assessing Structural Classification Using AlphaFold2 Models Through ECOD ‐Based Comparative Analysis
by: Takeshi Kawabata, et al.
Published: (2025)

Navigating the Pre‐ and Post‐ AlphaFold Divide: CAPRI 8th Evaluation Meeting, February 12–14, Grenoble, FR
by: Alexandre M. J. J. Bonvin, et al.
Published: (2025)

AlphaFold2‐guided description ofCoBaHMA, a novel family of bacterial domains within the heavy‐metal‐associated superfamily
by: Geoffroy Gaschignard, et al.
Published: (2024)

Modeling Protein–Protein and Protein–Ligand Interactions by the ClusPro Team in CASP16
by: Ryota Ashizawa, et al.
Published: (2025)

Protein–Protein Interaction Prediction via Structure‐Based Deep Learning
by: Yucong Liu, et al.
Published: (2024)

In Silico Structure‐Guided Design of Peptide Candidates Targeting γ‐Secretase Subunit Assembly
by: Selcen Arı Yuka, et al.
Published: (2026)

The Crystal Structure of Human Transport and Golgi Organization 2 Homolog ( TANGO2 ) Protein Reveals an αββα‐Fold Arrangement
by: Anne Cooper, et al.
Published: (2025)

Results of the Protein Engineering Tournament: An Open Science Benchmark for Protein Modeling and Design
by: Chase Armer, et al.
Published: (2025)

In Silico Analysis of Human NEK10 Reveals Novel Domain Architecture and Protein–Protein Interactions
by: Andriele S. Eichner, et al.
Published: (2025)

Prediction and Evaluation of Coronavirus and Human Protein–Protein Interactions Integrating Five Different Computational Methods
by: Binghua Li, et al.
Published: (2025)

FTDMP: A Framework for Protein–Protein, Protein–DNA, and Protein–RNA Docking and Scoring
by: Kliment Olechnovič, et al.
Published: (2025)

Protein Target Highlights in CASP16 : Insights From the Structure Providers
by: Leila T. Alexander, et al.
Published: (2025)

Protein–Ligand Structure Prediction by Template‐Guided Ensemble Docking Strategy
by: Keqiong Zhang, et al.
Published: (2025)

Cyan Thermal Proteins Derived From Thermal Green Protein
by: Acacia Jurkowski, et al.
Published: (2025)

Understanding the Roles of Secondary Shell Hotspots in Protein–Protein Complexes
by: Jayadevan Parvathy, et al.
Published: (2025)

An Overview of Property, Design, and Functionality of Linkers for Fusion Protein Construction
by: Hadis Chatrdooz, et al.
Published: (2025)

Improved Prediction of Stabilizing Mutations in Proteins by Incorporation of Mutational Effects on Ligand Binding
by: Srivarshini Ganesan, et al.
Published: (2024)

HAGGNN : Hydration‐Aware Geometric Graph Neural Network for Protein Thermal Stability Prediction
by: Yingying Jiang, et al.
Published: (2026)

Identification and Characterization of Outer Membrane Proteins and Membrane Spanning Protein Complexes in Brucella melitensis
by: Jahnvi Kapoor, et al.
Published: (2026)

DeepUSPS : Deep Learning‐Empowered Unconstrained‐Structural Protein Sequence Design
by: Zhichong Ma, et al.
Published: (2025)

3D‐ΔΔG: A Dual‐Channel Prediction Model for Protein–Protein Binding Affinity Changes Following Mutation Based on Protein 3D Structures
by: Yuxiang Wang, et al.
Published: (2025)

Using Short Molecular Dynamics Simulations to Determine the Important Features of Interactions in Antibody–Protein Complexes
by: A. Clay Richard, et al.
Published: (2024)

Critical Assessment of Protein Intrinsic Disorder Round 3 ‐ Predicting Disorder in the Era of Protein Language Models
by: Mahta Mehdiabadi, et al.
Published: (2025)

Efficient and accurate binding free energy calculation of Aβ 9–40 protofilament propagation
by: Christina V. Frost, et al.
Published: (2024)

PCANN Program for Structure‐Based Prediction of Protein–Protein Binding Affinity: Comparison With Other Neural‐Network Predictors
by: Olga O. Lebedenko, et al.
Published: (2025)

Hereditary Amyloidosis: Insights Into a Fibrinogen A Variant Protein
by: Elizabeth R. Cattaneo, et al.
Published: (2024)

Massive Sampling Strategy for Antibody–Antigen Targets in CAPRI Round 55 With MassiveFold
by: Nessim Raouraoua, et al.
Published: (2025)

Protein Involved in Initiation 1 Interaction With Starch Synthase 4 From Arabidopsis thaliana Induces Inhibition of Elongating Activity
by: Mélanie Bossu, et al.
Published: (2025)

Simpler Protein Domain Identification Using Spectral Clustering
by: Frédéric Cazals, et al.
Published: (2025)

Fusion Protein‐Assisted Crystallization of Human SUMO1
by: Aanchal Mishra, et al.
Published: (2025)

Impact of N‐Terminal Domain Conformation and Domain Interactions on RfaH Fold Switching
by: Bahman Seifi, et al.
Published: (2024)