Image de couverture de livre

Perspectives on benchmarking foundation models for network biology

Fuente: Wiley Open Access

Enregistré dans:

Détails bibliographiques
Auteur principal:	Christina V. Theodoris
Format:	Artículo Open Access
Publié:	Wiley 2024
Sujets:	Quantitative Biology
Accès en ligne:	Acceder al recurso
Tags:	Ajouter un tag Pas de tags, Soyez le premier à ajouter un tag!

Documents similaires

Current opinions on large cellular models
par: Minsheng Hao, et autres
Publié: (2024)

Boundary effects in biological planar networks: pentagonsdominate Pyropia marginal cells
par: Xu, Kai, et autres
Publié: (2025)

Building a continuous benchmarking ecosystem in bioinformatics
par: Mallona, Izaskun, et autres
Publié: (2024)

Stochastic thermodynamics for biological functions
par: Yuansheng Cao, et autres
Publié: (2024)

Mathematical modeling of evolution of cell networks in epithelial tissues
par: Ivan Krasnyakov
Publié: (2024)

Omnibenchmark: transparent, reproducible, extensible and standardized orchestration of solo and collaborative benchmarks
par: Mallona, Izaskun, et autres
Publié: (2024)

Multi‐omic data integration and exploiting metabolic models using systems biology approach increase precision in subtyping and early diagnosis of cancer
par: Ezgi Tanıl, et autres
Publié: (2025)

Reproducibility and scientific interpretation in the age of AI: consilience in biological systematics, ecology, and molecular biology
par: Santos, Charles Morphy D., et autres
Publié: (2025)

Randomness with constraints: constructing minimal models for high-dimensional biology
par: Nemenman, Ilya, et autres
Publié: (2025)

Towards mathematical spaces for biological processes
par: Tozzi, Arturo
Publié: (2026)

DOME Registry: Implementing community-wide recommendations for reporting supervised machine learning in biology
par: Attafi, Omar Abdelghani, et autres
Publié: (2024)

Protein design and RNA design: Perspectives
par: Xi Chen, et autres
Publié: (2025)

Constructing efficient bacterial cell factories to enable one‐carbon utilization based on quantitative biology: A review
par: Yazhen Song, et autres
Publié: (2024)

Design principles of multi-map variation in biological systems
par: Poyatos, Juan F
Publié: (2023)

A path towards AI-scale, interoperable biological data
par: Aevermann, Brian, et autres
Publié: (2025)

GloBIAS: strengthening the foundations of BioImage Analysis
par: Corbat, Agustin Andres, et autres
Publié: (2025)

A comprehensive review of cluster methods for drug–drug interaction network
par: Shuyuan Cao, et autres
Publié: (2025)

Perspectives on integrating artificial intelligence and single‐cell omics for cellular plasticity research
par: Ahmed Ghobashi, et autres
Publié: (2025)

Integrating experimental feedback improves generative models for biological sequences
par: Calvanese, Francesco, et autres
Publié: (2025)

DDI‐Transform: A neural network for predicting drug‐drug interaction events
par: Jiaming Su, et autres
Publié: (2024)

BioVeil MATRIX: Uncovering and categorizing vulnerabilities of agentic biological AI scientists
par: Provatas, Kimon Antonios, et autres
Publié: (2026)

Toward a general theory for the universality and scaling in critical thermal responses in biology
par: Arroyo, Jose Ignacio, et autres
Publié: (2025)

Spatial confinement and boundary constraints governing biological chirality: a simulation study
par: Tozzi, Arturo
Publié: (2026)

A decade of SBOL Visual: growing adoption of a diagram standard for engineering biology
par: Buecherl, Lukas, et autres
Publié: (2025)

A penalized integrative deep neural network for variable selection among multiple omics datasets
par: Yang Li, et autres
Publié: (2024)

MFCN‐DDI: Capsule network based on multimodal feature for multitype drug–drug interaction prediction
par: Jiayi Lu, et autres
Publié: (2025)

BiGraph‐DTA: Predicting drug–target interactions of hepatoprotective agents with graph convolutional networks
par: Arief Sartono, et autres
Publié: (2025)

A substructure‐aware graph neural network incorporating relation features for drug–drug interaction prediction
par: Liangcheng Dong, et autres
Publié: (2024)

Foundation models for bioinformatics
par: Ziyu Chen, et autres
Publié: (2024)

Neural networks for learning macroscopic chemotactic sensitivity from microscopic models
par: Erban, Radek
Publié: (2025)

scMOG: A graph neural network method for regulatory relationship‐preserving single‐cell multi‐omics integration
par: Yucheng Lu, et autres
Publié: (2026)

Large language models for bioinformatics
par: Wei Ruan, et autres
Publié: (2025)

Nano/micro-plastics effects in agricultural landscapes: an overlooked threat to pollination, biological pest control, and food security
par: Sheng, Dong, et autres
Publié: (2024)

Beyond networks, towards adaptive systems
par: Pessoa, Luiz
Publié: (2024)

Density estimation for ordinal biological sequences and its applications
par: Chen, Wei-Chia, et autres
Publié: (2024)

Dual network structure of the AV node
par: Maltsev, Anna V., et autres
Publié: (2024)

Piezoelectricity and flexoelectricity in biological cells: The role of cell structure and organelles
par: Venkateshwarlu, Akepogu, et autres
Publié: (2024)

Understanding the development of bacterial colony: Physiology, new technology, and modeling
par: Jingwen Zhu, et autres
Publié: (2025)

A comprehensive evaluation of large language models in mining gene relations and pathway knowledge
par: Muhammad Azam, et autres
Publié: (2024)

Diffusion model‐regularized implicit neural representation for computed tomography metal artifact reduction
par: Jie Wen, et autres
Publié: (2026)