Saved in:
| Main Authors: | , |
|---|---|
| Format: | Recurso digital |
| Language: | |
| Published: |
Zenodo
2023
|
| Online Access: | https://doi.org/10.5281/zenodo.10386962 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| _version_ | 1866902008420630528 |
|---|---|
| author | Gege, Emmanuella Onyinyechi Schymanski, Stanislaus J. |
| author_facet | Gege, Emmanuella Onyinyechi Schymanski, Stanislaus J. |
| contents | <p><strong>Copyright © 2019-2023 Luxembourg Institute of Science and Technology. All Rights Reserved.</strong></p> <p><strong>The code in this repository is distributed under the terms of the GNU General Public License 3.0 or any later version, unless stated otherwise. All other material is licensed under a Creative Commons Attribution 4.0 International license, unless stated otherwise.</strong></p> <p>This repository contains code related to the development and testing of a custom growth chamber that allows simultaneous monitoring of above-gound and below-ground fluxes in plants. It also contains data and codes related to analysing the cost/benefit ratios of maize plants grown under varying bulk densities. This study was carried out as the PhD project of Emmanuella Onyinyechi Osuebi-Iyke, under the supervision of Stanislaus Schymanski. The research was funded by the Luxembourg National Research fund (FNR ATTRACT programme (A16/SR/11254288))</p> <h2><a href="#repository-structure"></a>Repository structure</h2> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/above_ground">above-ground</a>: Above-ground fluxes data for maize and barley plants as obtained from the LI-6800.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/below_ground">below-ground</a>: Above-ground fluxes data for maize and barley plants as obtained from the LI-6800.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/multiplexer">multiplexer</a>: Multiplexer switch files required to assign fluxes to the correct growth chambers.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/Jupyter">Jupyter</a>: Jupyter notebooks with code and documentation</p> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/JJupyter/New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb">Jupyter/New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb</a>: Notebook with initial computations for the plant growth experiments with maize and barley plants under different bulk densities.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/Pickle_New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb">Jupyter/Pickle_New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb</a>: Notebook with more computations and plots for the plant growth experiments (cost/benefit analysis) with maize and barley plants under different bulk densities.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/Feb-2023_1_4-1_6_QB_Data_Analysis-Penetration_Resistance.ipynb">Jupyter/Data_Analysis-Penetration_Resistance.ipynb</a>: Notebook with more computations and plots for the "soil" penetration resistance tests.</p> </li> </ul> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/keithley">keithley</a>: Temperature data for out-going air from the custom growth chamber.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/pen_data_1_4-1_6BD">pen_data_1_4-1_6BD</a>: Contains data from penetration tests using the mini-penetrometer.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/llibreoffice_calc">libreoffice_calc</a>: All relevant spreadsheet documents relating to the plant growth experiments with maize plants under different bulk densities. Contains every data about the experimental plants including shoot height, leaf area etc.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/modules">modules</a>: Python files (.py) for importing elsewhere.</p> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/modules/computing.py">modules/computing.py</a>: Python module for computing equations.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/modules/plotting.py">modules/computing.py</a>: Python module with plotting functions.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/modules/plotting.py">modules/computing.py</a>: Python module with file reading functions.</p> </li> </ul> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/modules_exported">modules_exported</a>: Python files (.py) for variable and equation definitions.</p> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/modules_exported/Mathematical_model_equations_definitions.py">modules_exported/Mathematical_model_equations_definitions.py</a>: Python module with equation definitions.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/modules_exported/Mathematical_model_variable_definitions.py">modules_exported/Mathematical_model_variable_definitions.py</a>: Python module with variable definitions.</p> </li> </ul> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/pickles">pickles</a>: Saved files (after computation) for easy importance and further analysis.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/winRHIZO_txtfiles">winRHIZO_txtfiles</a>: Data for destructive plant root analysis.</p> </li> </ul> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_10386962 |
| institution | Zenodo |
| language | |
| publishDate | 2023 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Cost/Benefit Analysis of Carbon (C) allocation in Maize and Barley Gege, Emmanuella Onyinyechi Schymanski, Stanislaus J. <p><strong>Copyright © 2019-2023 Luxembourg Institute of Science and Technology. All Rights Reserved.</strong></p> <p><strong>The code in this repository is distributed under the terms of the GNU General Public License 3.0 or any later version, unless stated otherwise. All other material is licensed under a Creative Commons Attribution 4.0 International license, unless stated otherwise.</strong></p> <p>This repository contains code related to the development and testing of a custom growth chamber that allows simultaneous monitoring of above-gound and below-ground fluxes in plants. It also contains data and codes related to analysing the cost/benefit ratios of maize plants grown under varying bulk densities. This study was carried out as the PhD project of Emmanuella Onyinyechi Osuebi-Iyke, under the supervision of Stanislaus Schymanski. The research was funded by the Luxembourg National Research fund (FNR ATTRACT programme (A16/SR/11254288))</p> <h2><a href="#repository-structure"></a>Repository structure</h2> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/above_ground">above-ground</a>: Above-ground fluxes data for maize and barley plants as obtained from the LI-6800.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/below_ground">below-ground</a>: Above-ground fluxes data for maize and barley plants as obtained from the LI-6800.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/multiplexer">multiplexer</a>: Multiplexer switch files required to assign fluxes to the correct growth chambers.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/Jupyter">Jupyter</a>: Jupyter notebooks with code and documentation</p> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/JJupyter/New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb">Jupyter/New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb</a>: Notebook with initial computations for the plant growth experiments with maize and barley plants under different bulk densities.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/Pickle_New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb">Jupyter/Pickle_New_GC_Fluxes_Computations_Juelich_LIST_Maize-Barley_March_2023.ipynb</a>: Notebook with more computations and plots for the plant growth experiments (cost/benefit analysis) with maize and barley plants under different bulk densities.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/Feb-2023_1_4-1_6_QB_Data_Analysis-Penetration_Resistance.ipynb">Jupyter/Data_Analysis-Penetration_Resistance.ipynb</a>: Notebook with more computations and plots for the "soil" penetration resistance tests.</p> </li> </ul> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/keithley">keithley</a>: Temperature data for out-going air from the custom growth chamber.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/pen_data_1_4-1_6BD">pen_data_1_4-1_6BD</a>: Contains data from penetration tests using the mini-penetrometer.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/llibreoffice_calc">libreoffice_calc</a>: All relevant spreadsheet documents relating to the plant growth experiments with maize plants under different bulk densities. Contains every data about the experimental plants including shoot height, leaf area etc.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/modules">modules</a>: Python files (.py) for importing elsewhere.</p> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/modules/computing.py">modules/computing.py</a>: Python module for computing equations.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/modules/plotting.py">modules/computing.py</a>: Python module with plotting functions.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/Jupyter/modules/plotting.py">modules/computing.py</a>: Python module with file reading functions.</p> </li> </ul> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/modules_exported">modules_exported</a>: Python files (.py) for variable and equation definitions.</p> <ul> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/modules_exported/Mathematical_model_equations_definitions.py">modules_exported/Mathematical_model_equations_definitions.py</a>: Python module with equation definitions.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/blob/master/modules_exported/Mathematical_model_variable_definitions.py">modules_exported/Mathematical_model_variable_definitions.py</a>: Python module with variable definitions.</p> </li> </ul> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/pickles">pickles</a>: Saved files (after computation) for easy importance and further analysis.</p> </li> <li> <p><a href="../wave/CB_Ratios_Maize-and-Barley/-/tree/master/winRHIZO_txtfiles">winRHIZO_txtfiles</a>: Data for destructive plant root analysis.</p> </li> </ul> |
| title | Cost/Benefit Analysis of Carbon (C) allocation in Maize and Barley |
| url | https://doi.org/10.5281/zenodo.10386962 |