Figure 3 in Mitochondrial phvlogenomics of bumblebees* Bombus %Hvmenoptera: Apidae): a tale of structural variation* shiħs in selection constraints* and tree discordance
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2023
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| author | Gonçalves, Leonardo Tresoldi Françoso, Elaine Deprá, Maríndia |
| author_facet | Gonçalves, Leonardo Tresoldi Françoso, Elaine Deprá, Maríndia |
| contents | Figure 3. Major points of tree conflict in phylogenetic relationships of Bombus subgenera. Rows correspond to phylogenetic hypotheses, and columns correspond to the results from different datasets and methods (A–E, this study; F–H, other studies). A, maximum likelihood, PCG123 + RNA dataset; B, maximum likelihood, PCG12 + RNA dataset; C, maximum likelihood, AA dataset; D, Bayesian inference, PCG123 + RNA dataset; E, Bayesian inference, PCG12 + RNA dataset; F, topology from Cameron et al. (2007) using one mitochondrial (mt) and four nuclear (nu) genes; G, topology from Sun et al. (2021) using 2918 nu genes; H, topology from Santos Júnior et al. (2022) adding two mt genes to the matrix of Cameron et al. (2007). Nodes with PP ≥ 0.90 or BS ≥ 80 were considered supported, and partially supported nodes mainly refer to the paraphyly of Cullumanobombus in some of the recovered trees. |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_14592047 |
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| publishDate | 2023 |
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| spellingShingle | Figure 3 in Mitochondrial phvlogenomics of bumblebees* Bombus %Hvmenoptera: Apidae): a tale of structural variation* shiħs in selection constraints* and tree discordance Gonçalves, Leonardo Tresoldi Françoso, Elaine Deprá, Maríndia Biodiversity Taxonomy Figure 3. Major points of tree conflict in phylogenetic relationships of Bombus subgenera. Rows correspond to phylogenetic hypotheses, and columns correspond to the results from different datasets and methods (A–E, this study; F–H, other studies). A, maximum likelihood, PCG123 + RNA dataset; B, maximum likelihood, PCG12 + RNA dataset; C, maximum likelihood, AA dataset; D, Bayesian inference, PCG123 + RNA dataset; E, Bayesian inference, PCG12 + RNA dataset; F, topology from Cameron et al. (2007) using one mitochondrial (mt) and four nuclear (nu) genes; G, topology from Sun et al. (2021) using 2918 nu genes; H, topology from Santos Júnior et al. (2022) adding two mt genes to the matrix of Cameron et al. (2007). Nodes with PP ≥ 0.90 or BS ≥ 80 were considered supported, and partially supported nodes mainly refer to the paraphyly of Cullumanobombus in some of the recovered trees. |
| title | Figure 3 in Mitochondrial phvlogenomics of bumblebees* Bombus %Hvmenoptera: Apidae): a tale of structural variation* shiħs in selection constraints* and tree discordance |
| topic | Biodiversity Taxonomy |
| url | https://doi.org/10.5281/zenodo.14592047 |