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| Format: | Recurso digital |
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2025
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| Online Access: | https://doi.org/10.5281/zenodo.14859131 |
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| _version_ | 1866902228610056192 |
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| author | Famke Bäuerle |
| author_facet | Famke Bäuerle |
| contents | <p>Initial release of (renamed) qbic-pipelines/vcftocounts.</p> <h3><code>Changed</code></h3> <ul> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/25">#25</a> - Rename pipeline to vcftocounts + Prepare Release 2.0.0</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/28">#28</a> - Move test data to test-datasets, create filter nf-test</li> </ul> <h3><code>Added</code></h3> <ul> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/22">#22</a> - Remove ID column entries from VCFs</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/23">#23</a> - Add filtering of VEP annotated VCF files using bcftools/view (no conda for NXF_VER <= 24.10.2)</li> </ul> <h3><code>Fixed</code></h3> <ul> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/15">#15</a> - template update to v3.1.1</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/16">#16</a> - Fix bcftools/reheader bug</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/21">#21</a> - template update to v3.2.0</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/24">#24</a> - Change branching logic to enable caching again + rename vcf2mat to vcf2counts (thank you @awgymer for helping)</li> </ul> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_14859131 |
| institution | Zenodo |
| language | |
| publishDate | 2025 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | qbic-pipelines/vcftocounts: 2.0.0 - Rad Sepia Famke Bäuerle <p>Initial release of (renamed) qbic-pipelines/vcftocounts.</p> <h3><code>Changed</code></h3> <ul> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/25">#25</a> - Rename pipeline to vcftocounts + Prepare Release 2.0.0</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/28">#28</a> - Move test data to test-datasets, create filter nf-test</li> </ul> <h3><code>Added</code></h3> <ul> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/22">#22</a> - Remove ID column entries from VCFs</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/23">#23</a> - Add filtering of VEP annotated VCF files using bcftools/view (no conda for NXF_VER <= 24.10.2)</li> </ul> <h3><code>Fixed</code></h3> <ul> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/15">#15</a> - template update to v3.1.1</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/16">#16</a> - Fix bcftools/reheader bug</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/21">#21</a> - template update to v3.2.0</li> <li><a href="https://github.com/qbic-pipelines/vcftocounts/pull/24">#24</a> - Change branching logic to enable caching again + rename vcf2mat to vcf2counts (thank you @awgymer for helping)</li> </ul> |
| title | qbic-pipelines/vcftocounts: 2.0.0 - Rad Sepia |
| url | https://doi.org/10.5281/zenodo.14859131 |