Reconstitution of BNIP3/NIX-mitophagy initiation reveals hierarchical flexibility of the autophagy machinery

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Main Authors: Adriaenssens, Elias, Schaar, Stefan, Cook, Zeke, Stuck, Jan F.M., Sawa-Makarska, Justyna, Nguyen, Thanh Ngọc, Ren, Xuefen, Schuschnig, Martina, Romanov, Julia, Khuu, Grace, Uoselis, Louise, Lazarou, Michael, Hummer, Gerhard, Hurley, James, Martens, Sascha
Format: Recurso digital
Published: Zenodo 2025
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author Adriaenssens, Elias
Schaar, Stefan
Cook, Zeke
Stuck, Jan F.M.
Sawa-Makarska, Justyna
Nguyen, Thanh Ngọc
Ren, Xuefen
Schuschnig, Martina
Romanov, Julia
Khuu, Grace
Uoselis, Louise
Lazarou, Michael
Hummer, Gerhard
Hurley, James
Martens, Sascha
author_facet Adriaenssens, Elias
Schaar, Stefan
Cook, Zeke
Stuck, Jan F.M.
Sawa-Makarska, Justyna
Nguyen, Thanh Ngọc
Ren, Xuefen
Schuschnig, Martina
Romanov, Julia
Khuu, Grace
Uoselis, Louise
Lazarou, Michael
Hummer, Gerhard
Hurley, James
Martens, Sascha
contents <p><span>Selective autophagy is a lysosomal degradation pathway that is critical for maintaining cellular homeostasis by disposing of harmful cellular material. While the mechanisms by which soluble cargo receptors recruit the autophagy machinery are becoming increasingly clear, the principles governing how organelle-localized transmembrane cargo receptors initiate selective autophagy remain poorly understood. Here, we demonstrate that transmembrane cargo receptors can initiate autophagosome biogenesis not only by recruiting the upstream FIP200/ULK1 complex but also via a WIPI-ATG13 complex. This latter pathway is employed by the BNIP3/NIX receptors to trigger mitophagy. Additionally, other transmembrane mitophagy receptors, including FUNDC1 and BCL2L13, exclusively use the FIP200/ULK1 complex, while FKBP8 and the ER-phagy receptor TEX264 are capable of utilising both pathways to initiate autophagy. Our study defines the molecular rules for initiation by transmembrane cargo receptors, revealing remarkable flexibility in the assembly and activation of the autophagy machinery, with significant implications for therapeutic interventions.</span></p>
format Recurso digital
id zenodo_https___doi_org_10_5281_zenodo_15109147
institution Zenodo
language
publishDate 2025
publisher Zenodo
record_format zenodo
spellingShingle Reconstitution of BNIP3/NIX-mitophagy initiation reveals hierarchical flexibility of the autophagy machinery
Adriaenssens, Elias
Schaar, Stefan
Cook, Zeke
Stuck, Jan F.M.
Sawa-Makarska, Justyna
Nguyen, Thanh Ngọc
Ren, Xuefen
Schuschnig, Martina
Romanov, Julia
Khuu, Grace
Uoselis, Louise
Lazarou, Michael
Hummer, Gerhard
Hurley, James
Martens, Sascha
<p><span>Selective autophagy is a lysosomal degradation pathway that is critical for maintaining cellular homeostasis by disposing of harmful cellular material. While the mechanisms by which soluble cargo receptors recruit the autophagy machinery are becoming increasingly clear, the principles governing how organelle-localized transmembrane cargo receptors initiate selective autophagy remain poorly understood. Here, we demonstrate that transmembrane cargo receptors can initiate autophagosome biogenesis not only by recruiting the upstream FIP200/ULK1 complex but also via a WIPI-ATG13 complex. This latter pathway is employed by the BNIP3/NIX receptors to trigger mitophagy. Additionally, other transmembrane mitophagy receptors, including FUNDC1 and BCL2L13, exclusively use the FIP200/ULK1 complex, while FKBP8 and the ER-phagy receptor TEX264 are capable of utilising both pathways to initiate autophagy. Our study defines the molecular rules for initiation by transmembrane cargo receptors, revealing remarkable flexibility in the assembly and activation of the autophagy machinery, with significant implications for therapeutic interventions.</span></p>
title Reconstitution of BNIP3/NIX-mitophagy initiation reveals hierarchical flexibility of the autophagy machinery
url https://doi.org/10.5281/zenodo.15109147