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TABLE 1 in Phylogeny of North America's largest cicada radiation redefines Tibicinoides and Okanagana (Hemiptera: Auchenorrhyncha: Cicadidae: Tibicininae)

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Auteurs principaux:	Cole, Jeffrey A., Chatfield-Taylor, Will, Smeds, Elliott A., Cooley, John R., Gonzalez, Valorie A., Wong, Caressa
Format:	Recurso digital
Publié:	Zenodo 2023
Sujets:	Biodiversity Taxonomy
Accès en ligne:	Acceder al recurso
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_version_	1866901265535991808
author	Cole, Jeffrey A. Chatfield-Taylor, Will Smeds, Elliott A. Cooley, John R. Gonzalez, Valorie A. Wong, Caressa
author_facet	Cole, Jeffrey A. Chatfield-Taylor, Will Smeds, Elliott A. Cooley, John R. Gonzalez, Valorie A. Wong, Caressa
contents	<p><b>TABLE 1.</b> PCR primers and reaction conditions.</p><table><thead><tr><th>Gene</th><th>Primer</th><th>Primer sequence</th><th>Annealing time</th><th>Extension conditions</th><th>Reference</th></tr></thead><tbody><tr><th><i>EF1α</i></th><td>EF1a-F650-ambig</td><td>TGCTGCKGGTACTGGTGAAT</td><td>15 s</td><td>68℃, 75 s</td><td>Marshall <i>et al.</i> 2018</td></tr><tr><th></th><td>EF1-N-1419</td><td>ACACCAGTTTCAACTCTGCC</td><td></td><td></td><td>Sueur <i>et al.</i> 2007</td></tr><tr><th><i>ARD1</i></th><td>ARD1-1041F</td><td>TGGAAAGTGTTTCTGTCACATTTTCG</td><td>15 s</td><td>68℃, 75 s</td><td>Marshall <i>et al.</i> 2018</td></tr><tr><th></th><td>ARD1-1733R</td><td>ATCTCTTTTCATAGCGTATGCGTC</td><td></td><td></td><td></td></tr><tr><th></th><td>ARD1ForShort</td><td>CGCTTTGTGAGAGAATTRC</td><td></td><td></td><td></td></tr><tr><th></th><td>ARD1RevShort</td><td>GTATGCGTCTTCACCRTCTGC</td><td></td><td></td><td></td></tr><tr><th><i>CAM</i></th><td>Cal-60-for</td><td>AACGAAGTAGATGCCGATGG</td><td>45 s</td><td>72℃, 150 s</td><td>Buckley <i>et al.</i> 2006</td></tr><tr><th></th><td>Cal-72-rev</td><td>GTGTCCTTCATTTTNCKTGCCATCAT</td><td></td><td></td><td>UBC Insect Primer</td></tr><tr><th><i>16S</i></th><td>LR-J-12887</td><td>CCGGTCTGAACTCAGATCACGT</td><td>15 s</td><td>68℃, 75 s</td><td>Simon <i>et al.</i> 1994</td></tr><tr><th></th><td>LR-N-13398</td><td>CGCCTGTTTAACAAAAACAT</td><td></td><td></td><td></td></tr><tr><th><i>COI</i></th><td>JerryTGA</td><td>CAACAYYTATTTTGATTTTTTGG</td><td>60 s</td><td>72℃, 75 s</td><td>Sanborn <i>et al.</i> 2021</td></tr><tr><th></th><td>PatTGA</td><td>TTCATTGCACTAATCTGCCATATTA</td><td></td><td></td><td></td></tr><tr><th></th><td>JerryHU</td><td>CAACATTTGTTCTGATTCTTTGG</td><td></td><td></td><td>This study</td></tr><tr><th></th><td>PatHU</td><td>TTCATTGCACTATTCTGCCATATTA</td><td></td><td></td><td></td></tr><tr><th><i>COII</i></th><td>TL2-J-3033</td><td>AATATGGCAGATTAGTGC</td><td>60 s</td><td>72℃, 75 s</td><td>Simon <i>et al.</i> 1994</td></tr><tr><th></th><td>TGACOII</td><td>ATGCTATATCTCCTATAATAGACC</td><td></td><td></td><td>This study</td></tr><tr><th></th><td>TK-N-3786</td><td>GTTTAAGAGACCATTACTT</td><td></td><td></td><td>Simon <i>et al.</i> 1994</td></tr></tbody></table>
format	Recurso digital
id	zenodo_https___doi_org_10_5281_zenodo_15139862
institution	Zenodo
language
publishDate	2023
publisher	Zenodo
record_format	zenodo
spellingShingle	TABLE 1 in Phylogeny of North America's largest cicada radiation redefines Tibicinoides and Okanagana (Hemiptera: Auchenorrhyncha: Cicadidae: Tibicininae) Cole, Jeffrey A. Chatfield-Taylor, Will Smeds, Elliott A. Cooley, John R. Gonzalez, Valorie A. Wong, Caressa Biodiversity Taxonomy <p><b>TABLE 1.</b> PCR primers and reaction conditions.</p><table><thead><tr><th>Gene</th><th>Primer</th><th>Primer sequence</th><th>Annealing time</th><th>Extension conditions</th><th>Reference</th></tr></thead><tbody><tr><th><i>EF1α</i></th><td>EF1a-F650-ambig</td><td>TGCTGCKGGTACTGGTGAAT</td><td>15 s</td><td>68℃, 75 s</td><td>Marshall <i>et al.</i> 2018</td></tr><tr><th></th><td>EF1-N-1419</td><td>ACACCAGTTTCAACTCTGCC</td><td></td><td></td><td>Sueur <i>et al.</i> 2007</td></tr><tr><th><i>ARD1</i></th><td>ARD1-1041F</td><td>TGGAAAGTGTTTCTGTCACATTTTCG</td><td>15 s</td><td>68℃, 75 s</td><td>Marshall <i>et al.</i> 2018</td></tr><tr><th></th><td>ARD1-1733R</td><td>ATCTCTTTTCATAGCGTATGCGTC</td><td></td><td></td><td></td></tr><tr><th></th><td>ARD1ForShort</td><td>CGCTTTGTGAGAGAATTRC</td><td></td><td></td><td></td></tr><tr><th></th><td>ARD1RevShort</td><td>GTATGCGTCTTCACCRTCTGC</td><td></td><td></td><td></td></tr><tr><th><i>CAM</i></th><td>Cal-60-for</td><td>AACGAAGTAGATGCCGATGG</td><td>45 s</td><td>72℃, 150 s</td><td>Buckley <i>et al.</i> 2006</td></tr><tr><th></th><td>Cal-72-rev</td><td>GTGTCCTTCATTTTNCKTGCCATCAT</td><td></td><td></td><td>UBC Insect Primer</td></tr><tr><th><i>16S</i></th><td>LR-J-12887</td><td>CCGGTCTGAACTCAGATCACGT</td><td>15 s</td><td>68℃, 75 s</td><td>Simon <i>et al.</i> 1994</td></tr><tr><th></th><td>LR-N-13398</td><td>CGCCTGTTTAACAAAAACAT</td><td></td><td></td><td></td></tr><tr><th><i>COI</i></th><td>JerryTGA</td><td>CAACAYYTATTTTGATTTTTTGG</td><td>60 s</td><td>72℃, 75 s</td><td>Sanborn <i>et al.</i> 2021</td></tr><tr><th></th><td>PatTGA</td><td>TTCATTGCACTAATCTGCCATATTA</td><td></td><td></td><td></td></tr><tr><th></th><td>JerryHU</td><td>CAACATTTGTTCTGATTCTTTGG</td><td></td><td></td><td>This study</td></tr><tr><th></th><td>PatHU</td><td>TTCATTGCACTATTCTGCCATATTA</td><td></td><td></td><td></td></tr><tr><th><i>COII</i></th><td>TL2-J-3033</td><td>AATATGGCAGATTAGTGC</td><td>60 s</td><td>72℃, 75 s</td><td>Simon <i>et al.</i> 1994</td></tr><tr><th></th><td>TGACOII</td><td>ATGCTATATCTCCTATAATAGACC</td><td></td><td></td><td>This study</td></tr><tr><th></th><td>TK-N-3786</td><td>GTTTAAGAGACCATTACTT</td><td></td><td></td><td>Simon <i>et al.</i> 1994</td></tr></tbody></table>
title	TABLE 1 in Phylogeny of North America's largest cicada radiation redefines Tibicinoides and Okanagana (Hemiptera: Auchenorrhyncha: Cicadidae: Tibicininae)
topic	Biodiversity Taxonomy
url	https://doi.org/10.5281/zenodo.15139862