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TABLE 2 in Maintaining taxonomic accuracy in genetic databases: A duty for taxonomists- Reanalysis of the DNA sequences from Mercan et al. (2024) on the genus Potamothrix (Annelida, Clitellata) in Turkish lakes

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Hauptverfasser: Vivien, Régis, Martin, Patrick
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Biodiversity
Taxonomy
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_version_ 1866901925549572096
author Vivien, Régis
Martin, Patrick
author_facet Vivien, Régis
Martin, Patrick
contents <p><b>TABLE 2.</b> Identity of specimens identified as <i>P. hammoniensis</i> in Mercan <i>et al.</i> (2024), based on comparisons of the respective COI sequences with COI sequences deposited in GenBank before 2023, together with the lake of origin and the respective MOTU number (see Fig. 1). The last column indicates whether the spermathecal chaetae as described in Mercan <i>et al.</i> (2024) correspond to the DNA-based identification or not. s/n = sine numero.</p><table><thead><tr><th>GenBank accession number isolate (Mercan <i>et al.</i> 2024)</th><th>Lake name</th><th>Identification (this study)</th><th>MOTU numbers (see Fig. 1)</th><th>Spermathecal chaetae as described in Mercan <i>et al.</i> (2024)</th></tr></thead><tbody><tr><th>OR150127_Crnk1</th><td>Cernek</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150130_Mgn3</th><td>Mogan</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150129_Mgn2</th><td>Mogan</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150128_Mgn1</th><td>Mogan</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150115_Glbs3</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150114_Glbs2</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150120_Glbs8</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150113_Glbs1</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150121_Glbs9</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150122_Glbs10</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150119_Glbs7</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150116_Glbs4</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150118_Glbs6</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150117_Glbs5</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150142_Egrd3</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150140_Egrd1</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150143_Egrd4</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150141_Egrd2</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150126_Spnc24</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150123_Spnc1</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150124_Spnc16</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150125_Spnc17</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150138_Nmr8</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150131_Nmr1</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150134_Nmr4</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150135_Nmr5</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150133_Nmr3</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150136_Nmr6</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150137_Nmr7</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150139_Nmr9</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150132_Nmr2</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150146_Gla6</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr><tr><th>OR150144_Gla4</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr><tr><th>OR150145_Gla3</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr><tr><th>OR150147_Gla5</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr></tbody></table><p><sup>1</sup> Spermathecal chaetae seem to correspond to <i>P. hammoniensis</i>, but photos or other illustrations would be needed to confirm identity.</p><p><sup>2</sup> Spermathecal chaetae do not correspond to <i>P. hammoniensis</i>. They could correspond to <i>P. alatus paravanicus</i>, but photos or other illustrations would be needed.</p><p><sup>3</sup> Inconsistency between COI sequences and morphological descriptions: <i>Tubifex</i> is without spermathecal chaetae.</p>
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spellingShingle TABLE 2 in Maintaining taxonomic accuracy in genetic databases: A duty for taxonomists- Reanalysis of the DNA sequences from Mercan et al. (2024) on the genus Potamothrix (Annelida, Clitellata) in Turkish lakes
Vivien, Régis
Martin, Patrick
Biodiversity
Taxonomy
<p><b>TABLE 2.</b> Identity of specimens identified as <i>P. hammoniensis</i> in Mercan <i>et al.</i> (2024), based on comparisons of the respective COI sequences with COI sequences deposited in GenBank before 2023, together with the lake of origin and the respective MOTU number (see Fig. 1). The last column indicates whether the spermathecal chaetae as described in Mercan <i>et al.</i> (2024) correspond to the DNA-based identification or not. s/n = sine numero.</p><table><thead><tr><th>GenBank accession number isolate (Mercan <i>et al.</i> 2024)</th><th>Lake name</th><th>Identification (this study)</th><th>MOTU numbers (see Fig. 1)</th><th>Spermathecal chaetae as described in Mercan <i>et al.</i> (2024)</th></tr></thead><tbody><tr><th>OR150127_Crnk1</th><td>Cernek</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150130_Mgn3</th><td>Mogan</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150129_Mgn2</th><td>Mogan</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150128_Mgn1</th><td>Mogan</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150115_Glbs3</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150114_Glbs2</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150120_Glbs8</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150113_Glbs1</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150121_Glbs9</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150122_Glbs10</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150119_Glbs7</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150116_Glbs4</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150118_Glbs6</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150117_Glbs5</th><td>Gölbasi</td><td><i>P. bavaricus</i></td><td>11</td><td>as in <i>P. bavaricus</i></td></tr><tr><th>OR150142_Egrd3</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150140_Egrd1</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150143_Egrd4</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150141_Egrd2</th><td>Egirdir</td><td><i>Potamothrix</i> sp.</td><td>10</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150126_Spnc24</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150123_Spnc1</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150124_Spnc16</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150125_Spnc17</th><td>Sapanca</td><td><i>Potamothrix</i> sp.</td><td>9</td><td>possibly as in <i>P. hammoniensis</i> 1</td></tr><tr><th>OR150138_Nmr8</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150131_Nmr1</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150134_Nmr4</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150135_Nmr5</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150133_Nmr3</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150136_Nmr6</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150137_Nmr7</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150139_Nmr9</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150132_Nmr2</th><td>Nemrut</td><td><i>P. alatus paravanicus</i></td><td>2</td><td>different from <i>P. hammoniensis</i> 2</td></tr><tr><th>OR150146_Gla6</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr><tr><th>OR150144_Gla4</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr><tr><th>OR150145_Gla3</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr><tr><th>OR150147_Gla5</th><td>Gala</td><td><i>Tubifex</i> sp.</td><td>s/n</td><td>possibly as in <i>P. hammoniensis</i> 3</td></tr></tbody></table><p><sup>1</sup> Spermathecal chaetae seem to correspond to <i>P. hammoniensis</i>, but photos or other illustrations would be needed to confirm identity.</p><p><sup>2</sup> Spermathecal chaetae do not correspond to <i>P. hammoniensis</i>. They could correspond to <i>P. alatus paravanicus</i>, but photos or other illustrations would be needed.</p><p><sup>3</sup> Inconsistency between COI sequences and morphological descriptions: <i>Tubifex</i> is without spermathecal chaetae.</p>
title TABLE 2 in Maintaining taxonomic accuracy in genetic databases: A duty for taxonomists- Reanalysis of the DNA sequences from Mercan et al. (2024) on the genus Potamothrix (Annelida, Clitellata) in Turkish lakes
topic Biodiversity
Taxonomy
url https://doi.org/10.5281/zenodo.15160098

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