Alignments of white lupin pangenome scaffolds carrying LalbFTa1, LalbFTa1, LalbFTc1 and LalbFTc2 genes
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2025
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| author | Bielski, Wojciech Krzysztof Surma, Anna Maria Książkiewicz, Michał Rychel-Bielska, Sandra |
| author_facet | Bielski, Wojciech Krzysztof Surma, Anna Maria Książkiewicz, Michał Rychel-Bielska, Sandra |
| contents | <p>File “LalbFTa1_final_alignment_GWAS2.fasta” contains LalbFTa1 gene alignment in FASTA format carrying the following contigs:</p> <p>LD37_contig_002595</p> <p>P27174-4_contig_014309</p> <p>P27174-4_contig_000651</p> <p>LalbFTa1_Chr02</p> <p> </p> <p>File “LalbFTa2_final_alignment_GWAS2.fasta” contains LalbFTa2 gene alignment in FASTA format carrying the following contigs:</p> <p>Clovis_contig_006417</p> <p>GR38_contig_001073</p> <p>LalbFTa2_Chr21</p> <p> </p> <p>File “LalbFTc1_final_alignment_GWAS2.fasta” contains LalbFTc1 gene alignment in FASTA format carrying the following contigs:</p> <p>LD37_contig_001630</p> <p>P27174-4_contig_001786</p> <p>LalbFTc1_Chr14</p> <p>GR38_contig_001107</p> <p>and the following LalbFTc1 gene PCR products:</p> <p>PR36_LAP022b_PRFTc1F3</p> <p>PR36_LAP022e_PRFTC1F3</p> <p>PR42_LAP029b_PRFTC1F5</p> <p>PR42_LAP030a_PRFTC1F5</p> <p> </p> <p>File “LalbFTc2_final_alignment_GWAS2.fasta” contains LalbFTc2 gene alignment in FASTA format carrying the following contigs:</p> <p>Dieta_contig_008195</p> <p>P27174-4_contig_011400</p> <p>P27174-4_contig_003576</p> <p>GR38_contig_008213</p> <p>Dieta_contig_007291</p> <p>LalbFTc2_Chr09</p> <p> </p> <p>File “Major LalbFTa1, LalbFTa2, LalbFTc1 and LalbFTc2 gene indels.pdf” contains the list of all major indels (size <span>≥</span>3bp) present in the LalbFTa1, LalbFTa2, LalbFTc1 and LalbFTc2 gene alignments.</p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_15224869 |
| institution | Zenodo |
| language | eng |
| publishDate | 2025 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Alignments of white lupin pangenome scaffolds carrying LalbFTa1, LalbFTa1, LalbFTc1 and LalbFTc2 genes Bielski, Wojciech Krzysztof Surma, Anna Maria Książkiewicz, Michał Rychel-Bielska, Sandra Flowering Flowering locus T Sequence alignment Insertion Deletion <p>File “LalbFTa1_final_alignment_GWAS2.fasta” contains LalbFTa1 gene alignment in FASTA format carrying the following contigs:</p> <p>LD37_contig_002595</p> <p>P27174-4_contig_014309</p> <p>P27174-4_contig_000651</p> <p>LalbFTa1_Chr02</p> <p> </p> <p>File “LalbFTa2_final_alignment_GWAS2.fasta” contains LalbFTa2 gene alignment in FASTA format carrying the following contigs:</p> <p>Clovis_contig_006417</p> <p>GR38_contig_001073</p> <p>LalbFTa2_Chr21</p> <p> </p> <p>File “LalbFTc1_final_alignment_GWAS2.fasta” contains LalbFTc1 gene alignment in FASTA format carrying the following contigs:</p> <p>LD37_contig_001630</p> <p>P27174-4_contig_001786</p> <p>LalbFTc1_Chr14</p> <p>GR38_contig_001107</p> <p>and the following LalbFTc1 gene PCR products:</p> <p>PR36_LAP022b_PRFTc1F3</p> <p>PR36_LAP022e_PRFTC1F3</p> <p>PR42_LAP029b_PRFTC1F5</p> <p>PR42_LAP030a_PRFTC1F5</p> <p> </p> <p>File “LalbFTc2_final_alignment_GWAS2.fasta” contains LalbFTc2 gene alignment in FASTA format carrying the following contigs:</p> <p>Dieta_contig_008195</p> <p>P27174-4_contig_011400</p> <p>P27174-4_contig_003576</p> <p>GR38_contig_008213</p> <p>Dieta_contig_007291</p> <p>LalbFTc2_Chr09</p> <p> </p> <p>File “Major LalbFTa1, LalbFTa2, LalbFTc1 and LalbFTc2 gene indels.pdf” contains the list of all major indels (size <span>≥</span>3bp) present in the LalbFTa1, LalbFTa2, LalbFTc1 and LalbFTc2 gene alignments.</p> |
| title | Alignments of white lupin pangenome scaffolds carrying LalbFTa1, LalbFTa1, LalbFTc1 and LalbFTc2 genes |
| topic | Flowering Flowering locus T Sequence alignment Insertion Deletion |
| url | https://doi.org/10.5281/zenodo.15224869 |