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| Format: | Recurso digital |
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Zenodo
2025
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| Online Access: | https://doi.org/10.5281/zenodo.15286548 |
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Table of Contents:
- <p>Supplementary data for "<em>PAMPA: a software for peptide markers and taxonomic identification for ZooMS samples in Archaeology and Paleontology</em>":</p> <ul> <li>Case study 1 (Classification of MALDI-TOF and MALDI FTICR modern spectra): Moderns </li> <li>Case study 2 (Analysis of 104 archaeological MALDI FTICR mass spectra): Caours</li> <li>Case study 3 (Taxonomic identification of sheep and goat datasets): Sheeps_and_Goats</li> <li>Case study 4 (Taxonomic identification of African bovids): African_bovids</li> <li>Case study 5 (Detection of mixtures): Mixtures</li> <li>Case study 6 (Identification of new peptide markers by homology): Marine_mammals</li> <li>Case study 7 (De novo full peptide generation and filtering): Sheep_Filtering</li> </ul> <p>Each folder contains the MS spectra (CSV format), peptide tables, PAMPA result files and occasionally additional files such as annotation and MASCOT files. All details are provided in supplementary_material.pdf.</p> <p>The PAMPA software is available at <a href="https://github.com/touzet/pampa">https://github.com/touzet/pampa</a>, and the COL1A1 and COL1A2 sequences are available at <a href="https://github.com/touzet/pampa_sequences">https://github.com/touzet/pampa_sequences</a>.</p>