Saved in:
| Main Author: | |
|---|---|
| Format: | Recurso digital |
| Language: | |
| Published: |
Zenodo
2025
|
| Online Access: | https://doi.org/10.5281/zenodo.15556207 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| _version_ | 1866902046425219072 |
|---|---|
| author | Crowell, Helena Lucia |
| author_facet | Crowell, Helena Lucia |
| contents | <p><strong>WTx CosMx SMI data - </strong><strong>Napari inputs (slide 21)</strong>, including</p> <ul> <li>single-molecule RNA "targets"</li> <li>"images" of IF markers for <br> <ul> <li>DAPI (nuclei)</li> <li>CD45 (immune)</li> <li>CD68 (macrophages)</li> <li>PanCK (epithelia)</li> <li>B2M/CD298 (membrane)</li> </ul> </li> <li>"labels" annotating <ul> <li>field of view (FOV) placement</li> <li>cell segmentation boundaries</li> </ul> </li> <li>"shapes" delineating <ul> <li>histopathological domains <ul> <li>REF = reference mucosa</li> <li>TVA = tubulovillous adenoma</li> <li>CRC = colorectal cancer</li> </ul> </li> <li>regions of interest <ul> <li>BV = invasion-free blood vessels</li> <li>LI = lymphovascular invasions</li> </ul> </li> </ul> </li> </ul> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_15556207 |
| institution | Zenodo |
| language | |
| publishDate | 2025 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Supplementary Materiel to: Tracing colorectal malignancy transformation from cell to tissue scale Crowell, Helena Lucia <p><strong>WTx CosMx SMI data - </strong><strong>Napari inputs (slide 21)</strong>, including</p> <ul> <li>single-molecule RNA "targets"</li> <li>"images" of IF markers for <br> <ul> <li>DAPI (nuclei)</li> <li>CD45 (immune)</li> <li>CD68 (macrophages)</li> <li>PanCK (epithelia)</li> <li>B2M/CD298 (membrane)</li> </ul> </li> <li>"labels" annotating <ul> <li>field of view (FOV) placement</li> <li>cell segmentation boundaries</li> </ul> </li> <li>"shapes" delineating <ul> <li>histopathological domains <ul> <li>REF = reference mucosa</li> <li>TVA = tubulovillous adenoma</li> <li>CRC = colorectal cancer</li> </ul> </li> <li>regions of interest <ul> <li>BV = invasion-free blood vessels</li> <li>LI = lymphovascular invasions</li> </ul> </li> </ul> </li> </ul> |
| title | Supplementary Materiel to: Tracing colorectal malignancy transformation from cell to tissue scale |
| url | https://doi.org/10.5281/zenodo.15556207 |