Supplementary Data: Identification of hematopoietic cell state markers in acute leukemia using explainable machine learning
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| Natura: | Recurso digital |
| Lingua: | inglese |
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Zenodo
2025
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| _version_ | 1866902150902185984 |
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| author | Chen, David |
| author_facet | Chen, David |
| contents | <p><strong>Supplementary Data for "Identification of hematopoietic cell state markers in acute leukemia using explainable machine learning" </strong></p> <p><strong>File Description</strong></p> <ul> <li><strong>IsoMarker Output.zip: </strong>Output of IsoMarker applied to integrated AML pseudo-bulk RNA-seq atlas.</li> <li><strong>aml_raw_expression.csv.zip</strong>: Raw expression counts of AML pseudo-bulk RNA-seq atlas, stratified by donor and cell state.</li> <li><strong>aml_raw_expression.csv.zip</strong>: VST-normalized expression counts of AML pseudo-bulk RNA-seq atlas, stratified by donor and cell state.</li> <li><strong>aml_atlas_metadata.csv.zip</strong>: Metadata of AML pseudo-bulk RNA-seq atlas.</li> <li><strong>AML_Atlas.h5ad</strong>: Full AML pseudo-bulk RNA-seq atlas in H5AD format.</li> <li><strong>AML_Atlas_LeukemiavsHealthy.h5ad</strong>: AML pseudo-bulk RNA-seq atlas with Leukemia and Healthy annotations in H5AD format.</li> </ul> <p> </p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_15713160 |
| institution | Zenodo |
| language | eng |
| publishDate | 2025 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Supplementary Data: Identification of hematopoietic cell state markers in acute leukemia using explainable machine learning Chen, David acute myeloid leukemia Leukemia, Myeloid, Acute AML scRNA-seq RNA Transcriptome <p><strong>Supplementary Data for "Identification of hematopoietic cell state markers in acute leukemia using explainable machine learning" </strong></p> <p><strong>File Description</strong></p> <ul> <li><strong>IsoMarker Output.zip: </strong>Output of IsoMarker applied to integrated AML pseudo-bulk RNA-seq atlas.</li> <li><strong>aml_raw_expression.csv.zip</strong>: Raw expression counts of AML pseudo-bulk RNA-seq atlas, stratified by donor and cell state.</li> <li><strong>aml_raw_expression.csv.zip</strong>: VST-normalized expression counts of AML pseudo-bulk RNA-seq atlas, stratified by donor and cell state.</li> <li><strong>aml_atlas_metadata.csv.zip</strong>: Metadata of AML pseudo-bulk RNA-seq atlas.</li> <li><strong>AML_Atlas.h5ad</strong>: Full AML pseudo-bulk RNA-seq atlas in H5AD format.</li> <li><strong>AML_Atlas_LeukemiavsHealthy.h5ad</strong>: AML pseudo-bulk RNA-seq atlas with Leukemia and Healthy annotations in H5AD format.</li> </ul> <p> </p> |
| title | Supplementary Data: Identification of hematopoietic cell state markers in acute leukemia using explainable machine learning |
| topic | acute myeloid leukemia Leukemia, Myeloid, Acute AML scRNA-seq RNA Transcriptome |
| url | https://doi.org/10.5281/zenodo.15713160 |