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Bibliographic Details
Main Authors: Niedzicka, Marta, Mc Namara, Louise, Byrne, Stephen
Format: Recurso digital
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Published: Zenodo 2024
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Online Access:https://doi.org/10.5281/zenodo.16026702
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  • <p>Despite potential roles of natural plant communities as reservoirs of crop pathogens, their viromes are not well understood. The<br>choice of robust viral enrichment strategies in complex plant communities is a prerequisite if complex datasets of unknown viral<br>composition are to be understood. We use plant communities from arable field margins to compare two methods of viral nucleic<br>acid enrichment and compare three frequently used metagenomics assemblers. Both methods are well established across plant<br>virome studies; however, they have never been compared in the context of non-synthetic and complex plant communities.</p>