Saved in:
| Main Authors: | , , , , , , , , |
|---|---|
| Format: | Recurso digital |
| Language: | |
| Published: |
Zenodo
2025
|
| Online Access: | https://doi.org/10.5281/zenodo.17188227 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Table of Contents:
- <p>Data repository for the Human Lung Development Atlas:</p> <p>Preprint: https://doi.org/10.1101/2025.09.24.678382</p> <p>Github: https://github.com/GreenleafLab/HLDA</p> <p>This repository contains compressed ChromBPNet predicted sequence to accessibility contribution scores for each cell type. </p> <p>celltype_average_contribution_scores.tar.gz = contains the predicted contribution scores (celltype.h5) and a bigwig for visualization of predicted contribution scores (celltype.bw). Also recommend loading the peaks for each cell type of interest as BED files, available within the Zenodo record for HLDA-ATAC ArchR Projects (Part 1).</p> <p>To visualize the bigwig files for each cell type, please reference the DynSeq page and the WashU Epigenome Browser</p> <p>-DynSeq: https://kundajelab.github.io/dynseq-pages/</p> <p>-WashU Epigenome Browser: https://epigenomegateway.wustl.edu/browser/</p>