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| Format: | Recurso digital |
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Zenodo
2025
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| Online Access: | https://doi.org/10.5281/zenodo.17208972 |
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Table of Contents:
- <p>This dataset contains historical sars-cov-2 sequences that present 5 mutation constellations each in a given sequence.</p> <p>This may suggest that several mAbs are at risk of obsolesence which may or may not include Class-3 mAb</p> <p>The representative mAbs that may or may not be affected by this specific constellation such as "G339D, S375F, E484A, Q493R, L452R" may or may not include <br>S309 / Sotrovimab, REGN10987 (Imdevimab), LY-CoV1404 (Bebtelovimab), ADG-20 (Adintrevimab), BRII-196 / AZD1061 (Cilgavimab).</p> <p>Further study may or may not suggest escape from these mAbs.</p> <p>================================================================================</p> <p>PROGRESSIVE CONSTELLATION SUMMARY (G339D + S375F + E484A + Q493R + L452R)<br>================================================================================</p> <p> FILE: constellation_1mut.csv<br>--------------------------------------------------<br> Total unique sequences: 7,854,181<br> Top 10 sequences:<br> 1. USA/CA-LACPHL-AF03923/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 2. USA/CA-CDC-FG-153775/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 3. USA/PA-BOL-M21128099/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 4. USA/CA-CDC-FG-153938/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 5. USA/FL-CDC-FG-023410/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 6. USA/MS-MSPHL-0575/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 7. USA/GA-GPHL-2326/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 8. USA/CEPH0000012663/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 9. USA/JW3282/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 10. USA/JW3304/2021<br> → Location: USA | Year: 2021 | Accession: 2021</p> <p>FILE: constellation_2mut.csv<br>--------------------------------------------------<br> Total unique sequences: 4,492,055<br> Top 10 sequences:<br> 1. USA/CA-CDPH-3000263406/2021<br> → Location: USA | Year: 2021 | Accession: 2021<br> 2. Switzerland/ZG-ETHZ-672463/2021<br> → Location: Switzerland | Year: 2021 | Accession: 2021<br> 3. England/PLYM-2921E1F/2021<br> → Location: England | Year: 2021 | Accession: 2021<br> 4. Switzerland/SZ-ETHZ-34518318/2021<br> → Location: Switzerland | Year: 2021 | Accession: 2021<br> 5. Japan/SZ-NIG-Y222405/2022<br> → Location: Japan | Year: 2022 | Accession: 2022<br> 6. Japan/SZ-NIG-Y222415/2022<br> → Location: Japan | Year: 2022 | Accession: 2022<br> 7. USA/CA-CDPH-FS48099895/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 8. USA/CA-CDPH-FS48102929/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 9. USA/CA-CDPH-FS27887057/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 10. USA/CA-CDPH-FS25390299/2022<br> → Location: USA | Year: 2022 | Accession: 2022</p> <p> FILE: constellation_3mut.csv<br>--------------------------------------------------<br> Total unique sequences: 3,835,494<br> Top 10 sequences:<br> 1. Japan/SZ-NIG-Y222405/2022<br> → Location: Japan | Year: 2022 | Accession: 2022<br> 2. Japan/SZ-NIG-Y222415/2022<br> → Location: Japan | Year: 2022 | Accession: 2022<br> 3. USA/CA-CDPH-FS48099895/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 4. USA/CA-CDPH-FS48102929/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 5. USA/CA-CDPH-FS27887057/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 6. USA/CA-CDPH-FS25390299/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 7. USA/CA-CDPH-FS48101995/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 8. USA/CA-CDPH-FS48076159/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 9. USA/CA-CDPH-FS48102001/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 10. USA/CA-CDPH-FS48101831/2022<br> → Location: USA | Year: 2022 | Accession: 2022</p> <p>FILE: constellation_4mut.csv<br>--------------------------------------------------<br> Total unique sequences: 3,632,086<br> Top 10 sequences:<br> 1. Japan/SZ-NIG-Y222405/2022<br> → Location: Japan | Year: 2022 | Accession: 2022<br> 2. Japan/SZ-NIG-Y222415/2022<br> → Location: Japan | Year: 2022 | Accession: 2022<br> 3. USA/CA-CDPH-FS48099895/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 4. USA/CA-CDPH-FS48102929/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 5. USA/CA-CDPH-FS27887057/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 6. USA/CA-CDPH-FS25390299/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 7. USA/CA-CDPH-FS48101995/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 8. USA/CA-CDPH-FS48076159/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 9. USA/CA-CDPH-FS48102001/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 10. USA/CA-CDPH-FS48101831/2022<br> → Location: USA | Year: 2022 | Accession: 2022</p> <p>FILE: constellation_5mut.csv<br>--------------------------------------------------<br> Total unique sequences: 3,056<br> Top 10 sequences:<br> 1. USA/AL-CDC-STM-6H6GXAJ83/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 2. OY222177<br> → Location: Unknown | Year: Unknown | Accession: OY222177<br> 3. NZL/22CH5172/2022<br> → Location: NZL | Year: 2022 | Accession: 2022<br> 4. OZ188816<br> → Location: Unknown | Year: Unknown | Accession: OZ188816<br> 5. KEN/SS5217/2021<br> → Location: KEN | Year: 2021 | Accession: 2021<br> 6. USA/CA-CDC-FG-286379/2022<br> → Location: USA | Year: 2022 | Accession: 2022<br> 7. OX906942<br> → Location: Unknown | Year: Unknown | Accession: OX906942<br> 8. OY138144<br> → Location: Unknown | Year: Unknown | Accession: OY138144<br> 9. England/ALDP-2EB3DE3/2021<br> → Location: England | Year: 2021 | Accession: 2021<br> 10. England/LSPA-2FC7176/2021<br> → Location: England | Year: 2021 | Accession: 2021</p> <p>Summary complete.</p> <p>--------------------------------------------------</p> <p>Any Queries / Critiques / Collaboration welcomed </p> <p>E-Mail: TahirHB@Hotmail.com</p>