Data Set used for the manuscript titled "Effects of Symmetry on Coupled Rotary Molecular Motors" by S.iranbakhsh and D. A. Sivak
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| Formato: | Recurso digital |
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2025
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| _version_ | 1866902303904104448 |
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| author | Iranbakhsh, Sara |
| author_facet | Iranbakhsh, Sara |
| contents | <p>Data used in the manuscript.</p> <p><strong>Guide:</strong></p> <p>used in creating Fig 2, 3, 5, S5, S9 and partially Fig S2, S3: pfe_set1, pfe_set2</p> <p>used in creating Fig 4: pfe_scaling_different_barriers</p> <p>used in creating Fig S2: constant_P1_vs_force_S2</p> <p>used in creating Fig S3: constant_n1_3_n1_5_n1_7_S3</p> <p>used in creating Fig S4: pfe_scaling_different_barriers</p> <p>used in creating Fig S6: constant_raw_data_S6</p> <p> </p> <p><strong>Analization Guide:</strong></p> <p>pfe file columns represent the following:</p> <p>| Column # | Variable | Description |<br>|----------|-------------------------------|------------------------------------------------------------------|<br>| 1 | `p_now[i, j]` | Steady-state probability at grid position (i, j) at current time |<br>| 2 | `p_equil[i, j]` | Equilibrium probability at grid position (i, j) |<br>| 3 | `potential_at_pos[i, j]` | Potential energy value at grid position (i, j) |<br>| 4 | `drift_at_pos[0, i, j]` | x-component of drift vector at (i, j) |<br>| 5 | `drift_at_pos[1, i, j]` | y-component of drift vector at (i, j) |<br>| 6 | `diffusion_at_pos[0, i, j]` | Diffusion tensor component Dₓₓ at (i, j) |<br>| 7 | `diffusion_at_pos[1, i, j]` | Diffusion tensor component Dₓᵧ at (i, j) |<br>| 8 | `diffusion_at_pos[2, i, j]` | Diffusion tensor component Dᵧₓ at (i, j) |<br>| 9 | `diffusion_at_pos[3, i, j]` | Diffusion tensor component Dᵧᵧ at (i, j) |</p> <p> </p> <p> </p> <p> </p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_17316573 |
| institution | Zenodo |
| language | |
| publishDate | 2025 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Data Set used for the manuscript titled "Effects of Symmetry on Coupled Rotary Molecular Motors" by S.iranbakhsh and D. A. Sivak Iranbakhsh, Sara <p>Data used in the manuscript.</p> <p><strong>Guide:</strong></p> <p>used in creating Fig 2, 3, 5, S5, S9 and partially Fig S2, S3: pfe_set1, pfe_set2</p> <p>used in creating Fig 4: pfe_scaling_different_barriers</p> <p>used in creating Fig S2: constant_P1_vs_force_S2</p> <p>used in creating Fig S3: constant_n1_3_n1_5_n1_7_S3</p> <p>used in creating Fig S4: pfe_scaling_different_barriers</p> <p>used in creating Fig S6: constant_raw_data_S6</p> <p> </p> <p><strong>Analization Guide:</strong></p> <p>pfe file columns represent the following:</p> <p>| Column # | Variable | Description |<br>|----------|-------------------------------|------------------------------------------------------------------|<br>| 1 | `p_now[i, j]` | Steady-state probability at grid position (i, j) at current time |<br>| 2 | `p_equil[i, j]` | Equilibrium probability at grid position (i, j) |<br>| 3 | `potential_at_pos[i, j]` | Potential energy value at grid position (i, j) |<br>| 4 | `drift_at_pos[0, i, j]` | x-component of drift vector at (i, j) |<br>| 5 | `drift_at_pos[1, i, j]` | y-component of drift vector at (i, j) |<br>| 6 | `diffusion_at_pos[0, i, j]` | Diffusion tensor component Dₓₓ at (i, j) |<br>| 7 | `diffusion_at_pos[1, i, j]` | Diffusion tensor component Dₓᵧ at (i, j) |<br>| 8 | `diffusion_at_pos[2, i, j]` | Diffusion tensor component Dᵧₓ at (i, j) |<br>| 9 | `diffusion_at_pos[3, i, j]` | Diffusion tensor component Dᵧᵧ at (i, j) |</p> <p> </p> <p> </p> <p> </p> |
| title | Data Set used for the manuscript titled "Effects of Symmetry on Coupled Rotary Molecular Motors" by S.iranbakhsh and D. A. Sivak |
| url | https://doi.org/10.5281/zenodo.17316573 |