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Main Authors: Castillo, Simon P, Gautam, Tanishq, Pinao, Karina, Salvatierra, Maria Ester, Serrano, Alejandra, Ercan, Caner, Rodriguez, Berta Leticia, Acosta, Paul, Chen, Pingjun, Shokrollahi, Yasin, Lau, Alexandria, Kwong, Lawrence, Huse, Jason, Pan, Xiaoxi, Mosaic, Patient, Solis-Soto, Luisa, Yuan, Yinyin
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Published: Zenodo 2025
Online Access:https://doi.org/10.5281/zenodo.17363402
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author Castillo, Simon P
Gautam, Tanishq
Pinao, Karina
Salvatierra, Maria Ester
Serrano, Alejandra
Ercan, Caner
Rodriguez, Berta Leticia
Acosta, Paul
Chen, Pingjun
Shokrollahi, Yasin
Lau, Alexandria
Kwong, Lawrence
Huse, Jason
Pan, Xiaoxi
Mosaic, Patient
Solis-Soto, Luisa
Yuan, Yinyin
author_facet Castillo, Simon P
Gautam, Tanishq
Pinao, Karina
Salvatierra, Maria Ester
Serrano, Alejandra
Ercan, Caner
Rodriguez, Berta Leticia
Acosta, Paul
Chen, Pingjun
Shokrollahi, Yasin
Lau, Alexandria
Kwong, Lawrence
Huse, Jason
Pan, Xiaoxi
Mosaic, Patient
Solis-Soto, Luisa
Yuan, Yinyin
contents <p>Code and dataset for the review process of the manuscript "Hybrid generalist-specialist AI for scaling spatial pathomics".</p> <p><strong>Data provided in this repository is solely for journal peer review and must not be used for any other purpose.</strong></p> <p>Files:</p> <ul> <li><strong>metadata_tumorclass.csv</strong>: file with tumor type per case.</li> <li><strong>raw_dspproteomics.csv:</strong> file with raw counts DSP proteomics per ROI segment per case.</li> <li><strong>code_with_data.zip:</strong> zip file with a minimal dataset to test the Python code. It includes two subfolders for ROI prediction in spatial proteomics (DSP) and spatial transcriptomics (ST). In each case, comprehensive README files facilitate navigation.</li> </ul>
format Recurso digital
id zenodo_https___doi_org_10_5281_zenodo_17363402
institution Zenodo
language
publishDate 2025
publisher Zenodo
record_format zenodo
spellingShingle Hybrid generalist-specialist AI for scaling spatial pathomics
Castillo, Simon P
Gautam, Tanishq
Pinao, Karina
Salvatierra, Maria Ester
Serrano, Alejandra
Ercan, Caner
Rodriguez, Berta Leticia
Acosta, Paul
Chen, Pingjun
Shokrollahi, Yasin
Lau, Alexandria
Kwong, Lawrence
Huse, Jason
Pan, Xiaoxi
Mosaic, Patient
Solis-Soto, Luisa
Yuan, Yinyin
<p>Code and dataset for the review process of the manuscript "Hybrid generalist-specialist AI for scaling spatial pathomics".</p> <p><strong>Data provided in this repository is solely for journal peer review and must not be used for any other purpose.</strong></p> <p>Files:</p> <ul> <li><strong>metadata_tumorclass.csv</strong>: file with tumor type per case.</li> <li><strong>raw_dspproteomics.csv:</strong> file with raw counts DSP proteomics per ROI segment per case.</li> <li><strong>code_with_data.zip:</strong> zip file with a minimal dataset to test the Python code. It includes two subfolders for ROI prediction in spatial proteomics (DSP) and spatial transcriptomics (ST). In each case, comprehensive README files facilitate navigation.</li> </ul>
title Hybrid generalist-specialist AI for scaling spatial pathomics
url https://doi.org/10.5281/zenodo.17363402