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| Format: | Recurso digital |
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Zenodo
2026
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| Online Access: | https://doi.org/10.5281/zenodo.18388157 |
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Table of Contents:
- <p>Input data files for the analysis of UK species (from UKSI database) against barcode marker genes:<br><br>1. COI (BOLD) = result_output.tsv.gz (9th January 2026 public snapshot)<br>2. RBCL (NCBI) = ncbi_rbcl_otu.tsv.gz (ncbi download 23rd January 2026)<br>3. ITS (UNITE) = unite_tsv_output.tsv.gz (sh_general_release_s_all_19.02.2025 = https://doi.org/10.15156/BIO/3301232)<br>4. 12S (MIDORI2) = midori_12S_otu.tsv.gz (MIDORI2_TOTAL_NUC_GB269)<br>5. 16S (MIDORI2) = midori_16S_otu.tsv.gz (MIDORI2_TOTAL_NUC_GB269)<br><br></p> <p>Analysed using these scripts: https://github.com/ukbol/mind-the-gap<br><br>Presented using these scripts: https://github.com/ukbol/species<br><br>Presented on this website: https://ukbol.github.io/species/index.html</p> <p>The overarching mind-map for the gap analysis process is included as gaplist-pipeline.pdf</p>