Data and code for: Dynamic transposable element expression during Hydra head regeneration
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2026
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| _version_ | 1866902056939290624 |
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| author | Macias-Muñoz, Aide |
| author_facet | Macias-Muñoz, Aide |
| contents | <p>Bash shell scripts for repeat modeler, masker, and STAR mapping.</p> <p>Custom script to keep class_id from repeat masker output (rmOUT_to_gtf.awk)</p> <p>Custom script to merge counts (R_script_merge_counts)</p> <p>Counts table including all genes and TEs used for analysis (tsv table)</p> <p>R script includes DDseq analysis, pairwise 12h comparisons, volcano plots, and heatmap code (Hydra_DDEseq_TE.r)</p> <p> </p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_18393988 |
| institution | Zenodo |
| language | |
| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Data and code for: Dynamic transposable element expression during Hydra head regeneration Macias-Muñoz, Aide <p>Bash shell scripts for repeat modeler, masker, and STAR mapping.</p> <p>Custom script to keep class_id from repeat masker output (rmOUT_to_gtf.awk)</p> <p>Custom script to merge counts (R_script_merge_counts)</p> <p>Counts table including all genes and TEs used for analysis (tsv table)</p> <p>R script includes DDseq analysis, pairwise 12h comparisons, volcano plots, and heatmap code (Hydra_DDEseq_TE.r)</p> <p> </p> |
| title | Data and code for: Dynamic transposable element expression during Hydra head regeneration |
| url | https://doi.org/10.5281/zenodo.18393988 |