CPL-Code: a corpus annotated with bioinformatics tools names in executable code of Nextflow workflows
Fuente:
Zenodo
Saved in:
| Main Authors: | Sebe, Clemence, Ferret, Olivier, Névéol, Aurélie, COHEN-BOULAKIA, Sarah |
|---|---|
| Format: | Recurso digital |
| Published: |
Zenodo
2026
|
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
CPL-Gold-Entity-Link: annotated entity linking corpus between publications and executable code for Nextflow workflows
by: Sebe, Clemence, et al.
Published: (2026)
by: Sebe, Clemence, et al.
Published: (2026)
Extracting Information in a Low-resource Setting: Case Study on Bioinformatics Workflows
by: Sebe, Clémence, et al.
Published: (2024)
by: Sebe, Clémence, et al.
Published: (2024)
Supporting Workflow Reproducibility by Linking Bioinformatics Tools across Papers and Executable Code
by: Sebe, Clémence, et al.
Published: (2026)
by: Sebe, Clémence, et al.
Published: (2026)
yongle-mural-annotation-tools: browser-based IAA and annotation-workflow tools for Yongle Palace mural patches
by: Liang, Bingbing
Published: (2026)
by: Liang, Bingbing
Published: (2026)
PARHAF, a human-authored corpus of clinical reports for fictitious patients in French
by: Tannier, Xavier, et al.
Published: (2026)
by: Tannier, Xavier, et al.
Published: (2026)
Few-shot clinical entity recognition in English, French and Spanish: masked language models outperform generative model prompting
by: Naguib, Marco, et al.
Published: (2024)
by: Naguib, Marco, et al.
Published: (2024)
The Environmental Impacts of Machine Learning Training Keep Rising Evidencing Rebound Effect
by: Morand, Clément, et al.
Published: (2025)
by: Morand, Clément, et al.
Published: (2025)
How Green Can AI Be? A Study of Trends in Machine Learning Environmental Impacts
by: Morand, Clément, et al.
Published: (2024)
by: Morand, Clément, et al.
Published: (2024)
A Benchmark Evaluation of Clinical Named Entity Recognition in French
by: Bannour, Nesrine, et al.
Published: (2024)
by: Bannour, Nesrine, et al.
Published: (2024)
WOW with Nextflow and Kubernetes - Traces and Evaluation
by: Fabian Lehmann
Published: (2025)
by: Fabian Lehmann
Published: (2025)
Terra-Acqua, adaptable definition and execution of workflows
by: Khalid Belhajjame
Published: (2004)
by: Khalid Belhajjame
Published: (2004)
ImmunoNX: a robust bioinformatics workflow to support personalized neoantigen vaccine trials
by: Singhal, Kartik, et al.
Published: (2025)
by: Singhal, Kartik, et al.
Published: (2025)
PacBio Nextflow Workshop Sequence Data
by: HTM
Published: (2025)
by: HTM
Published: (2025)
HunFlair2 in a cross-corpus evaluation of biomedical named entity recognition and normalization tools
by: Sänger, Mario, et al.
Published: (2024)
by: Sänger, Mario, et al.
Published: (2024)
Chapter Identifying cliffs morphodynamics: a 3D GIS approach for a better hazard management. Examples in Croatia
by: COHEN, Olivier, et al.
Published: (2025)
by: COHEN, Olivier, et al.
Published: (2025)
Pronominal anaphora in Basque: annotation of a real corpus
by: Itziar Aduriz
Published: (2006)
by: Itziar Aduriz
Published: (2006)
Cross-modal Retrieval for Knowledge-based Visual Question Answering
by: Lerner, Paul, et al.
Published: (2024)
by: Lerner, Paul, et al.
Published: (2024)
La muerte según Baruch Spinoza: aproximaciones a una noción problemática
by: DIANA COHEN
Published: (2001)
by: DIANA COHEN
Published: (2001)
OptimOTU: Taxonomically aware OTU clustering with optimized thresholds and a bioinformatics workflow for metabarcoding data
by: Furneaux, Brendan, et al.
Published: (2025)
by: Furneaux, Brendan, et al.
Published: (2025)
Life Cycle-Aware Evaluation of Knowledge Distillation for Machine Translation: Environmental Impact and Translation Quality Trade-offs
by: Attieh, Joseph, et al.
Published: (2026)
by: Attieh, Joseph, et al.
Published: (2026)
FlexLMM: a Nextflow linear mixed model framework for GWAS
by: Pierotti, Saul, et al.
Published: (2024)
by: Pierotti, Saul, et al.
Published: (2024)
Richard Wagner – Overtures (A corpus of annotated scores)
by: Johannes Hentschel, et al.
Published: (2025)
by: Johannes Hentschel, et al.
Published: (2025)
Designing an active learning based system for corpus annotation
by: Bertjan Busser
Published: (2005)
by: Bertjan Busser
Published: (2005)
Crise sociale, question nationale et violence urbaine. Retour sur la mystérieuse Kale Borroka en Espagne.
by: Jérôme Ferret
Published: (2012)
by: Jérôme Ferret
Published: (2012)
Biomedical systems biology workflow orchestration and execution with PoSyMed
by: Süwer, Simon, et al.
Published: (2026)
by: Süwer, Simon, et al.
Published: (2026)
The matter with(in) CPL
by: Giani, Leonardo, et al.
Published: (2025)
by: Giani, Leonardo, et al.
Published: (2025)
Zuraya Monroy Nasr, El problema cuerpo-mente en Descartes: una cuestión semántica, Universidad Nacional Autónoma de México, México, 2006, 186 pp.
by: DIANA COHEN
Published: (2007)
by: DIANA COHEN
Published: (2007)
REDEVELOPMENT OF A CURRICULUM FOR SOCIALLY MALADJUSTED AND EMOTIONALLY DISTURBED CHILDREN WITH A COROLLARY OF TEACHER TRAINING.
by: COHEN, ROSALYN S.
Published: (1966)
by: COHEN, ROSALYN S.
Published: (1966)
Reseña de "El árbitro arbitrario: Hobbes, Spinoza y la libertad de expresión" de Leiser Madanes
by: DIANA COHEN
Published: (2003)
by: DIANA COHEN
Published: (2003)
Enzo TRAVERSO , Los judíos y Alemania. Ensayos sobre la “simbiosis judío-alemana”, Barcelona, Pre-Textos, 2005.
by: ESTHER COHEN
Published: (2005)
by: ESTHER COHEN
Published: (2005)
Messianisme et politique: Note sur le sionisme religieux
by: Joseph COHEN
Published: (2008)
by: Joseph COHEN
Published: (2008)
Reseña de "Vida, pasión y razón en grandes filósofos" de Atilano Domínguez Basalo (comp.)
by: DIANA COHEN
Published: (2003)
by: DIANA COHEN
Published: (2003)
Text-to-Image Alignment in Denoising-Based Models through Step Selection
by: Grimal, Paul, et al.
Published: (2025)
by: Grimal, Paul, et al.
Published: (2025)
Prompt engineering paradigms for medical applications: scoping review and recommendations for better practices
by: Zaghir, Jamil, et al.
Published: (2024)
by: Zaghir, Jamil, et al.
Published: (2024)
WOW-WorkflowScheduler/ResultsAndEvaluation: WOW Evaluation with Nextflow and Kubernetes
by: Fabian Lehmann
Published: (2025)
by: Fabian Lehmann
Published: (2025)
A Nextflow-Based Automated Pipeline for Viral Assembly and Characterisation (EVEREST)
by: Patricia
Published: (2025)
by: Patricia
Published: (2025)
Use of a bioinformatic tool for the molecular epidemiology of SARS-CoV-2
by: Jorge Vega-Fernández
Published: (2021)
by: Jorge Vega-Fernández
Published: (2021)
Dbcanlight: a lightweight CAZyme annotation tool
by: Tsai, Cheng-Hung, et al.
Published: (2025)
by: Tsai, Cheng-Hung, et al.
Published: (2025)
FRACCO: A gold-standard annotated corpus of oncological entities with ICD-O-3.1 normalisation
by: Pignat, Johann, et al.
Published: (2025)
by: Pignat, Johann, et al.
Published: (2025)
The executable code of physical layers
by: Lei, XuXin
Published: (2025)
by: Lei, XuXin
Published: (2025)
Similar Items
-
CPL-Gold-Entity-Link: annotated entity linking corpus between publications and executable code for Nextflow workflows
by: Sebe, Clemence, et al.
Published: (2026) -
Extracting Information in a Low-resource Setting: Case Study on Bioinformatics Workflows
by: Sebe, Clémence, et al.
Published: (2024) -
Supporting Workflow Reproducibility by Linking Bioinformatics Tools across Papers and Executable Code
by: Sebe, Clémence, et al.
Published: (2026) -
yongle-mural-annotation-tools: browser-based IAA and annotation-workflow tools for Yongle Palace mural patches
by: Liang, Bingbing
Published: (2026) -
PARHAF, a human-authored corpus of clinical reports for fictitious patients in French
by: Tannier, Xavier, et al.
Published: (2026)