Code and metadata for "From canopy to understory: Unravelling multi-strata drivers of tree beta diversity in the Peruvian Amazon"

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Main Authors: Millano, Daniel, Cayuela, Luis, de Aledo, Julia G., Ben Saadi, Celina, Matas-Granados, Laura, Salinas, Norma, La Torre Cuadros, Maria de los Angeles, Macía, Manuel J.
Format: Recurso digital
Language:English
Published: Zenodo 2026
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_version_ 1866902324747698176
author Millano, Daniel
Cayuela, Luis
de Aledo, Julia G.
Ben Saadi, Celina
Matas-Granados, Laura
Salinas, Norma
La Torre Cuadros, Maria de los Angeles
Macía, Manuel J.
author_facet Millano, Daniel
Cayuela, Luis
de Aledo, Julia G.
Ben Saadi, Celina
Matas-Granados, Laura
Salinas, Norma
La Torre Cuadros, Maria de los Angeles
Macía, Manuel J.
contents <p>This repository contains two R scripts and associated plot-level metadata used in the study <strong>"From canopy to understory: Unravelling multi-strata drivers of tree beta diversity in the Peruvian Amazon"</strong>, intended for submission to the journal <strong><em>Plant Diversity</em></strong>.</p> <p>The scripts reproduce key analyses performed in the study:</p> <ol> <li> <p>Mantel and partial Mantel tests between floristic, environmental and geographic distance matrices, including variable selection procedures.</p> </li> <li> <p>Variance partitioning using climatic, edaphic and geographic variables.</p> </li> <li> <p>PERMANOVA analyses to identify significant environmental predictors, followed by NMDS ordinations with environmental fitting (envfit) based on the selected variables.</p> </li> </ol> <p>The metadata file includes geolocation, elevation, and forest type for each plot. Floristic data are available on request via ForestPlots.</p> <p>This Zenodo record is currently private and will be made public upon article acceptance.</p>
format Recurso digital
id zenodo_https___doi_org_10_5281_zenodo_18630572
institution Zenodo
language eng
publishDate 2026
publisher Zenodo
record_format zenodo
spellingShingle Code and metadata for "From canopy to understory: Unravelling multi-strata drivers of tree beta diversity in the Peruvian Amazon"
Millano, Daniel
Cayuela, Luis
de Aledo, Julia G.
Ben Saadi, Celina
Matas-Granados, Laura
Salinas, Norma
La Torre Cuadros, Maria de los Angeles
Macía, Manuel J.
beta diversity
NMDS
PERMANOVA
Mantel test
Amazon forest
environmental filtering
R script
tropical ecology
floristic composition
<p>This repository contains two R scripts and associated plot-level metadata used in the study <strong>"From canopy to understory: Unravelling multi-strata drivers of tree beta diversity in the Peruvian Amazon"</strong>, intended for submission to the journal <strong><em>Plant Diversity</em></strong>.</p> <p>The scripts reproduce key analyses performed in the study:</p> <ol> <li> <p>Mantel and partial Mantel tests between floristic, environmental and geographic distance matrices, including variable selection procedures.</p> </li> <li> <p>Variance partitioning using climatic, edaphic and geographic variables.</p> </li> <li> <p>PERMANOVA analyses to identify significant environmental predictors, followed by NMDS ordinations with environmental fitting (envfit) based on the selected variables.</p> </li> </ol> <p>The metadata file includes geolocation, elevation, and forest type for each plot. Floristic data are available on request via ForestPlots.</p> <p>This Zenodo record is currently private and will be made public upon article acceptance.</p>
title Code and metadata for "From canopy to understory: Unravelling multi-strata drivers of tree beta diversity in the Peruvian Amazon"
topic beta diversity
NMDS
PERMANOVA
Mantel test
Amazon forest
environmental filtering
R script
tropical ecology
floristic composition
url https://doi.org/10.5281/zenodo.18630572