icenzano/NicheMGUSMM_2025: v1.0.0 – Initial submission version
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2026
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| _version_ | 1866901970549211136 |
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| author | icenzano |
| author_facet | icenzano |
| contents | <p>Version 1.0.0 of the analysis code accompanying the manuscript:</p> <p>"Stromal and Endothelial Transcriptional Changes during MGUS-to-Myeloma Progression and Treatment Response."</p> <p>This release includes:</p> <ul> <li>Single-cell RNA-seq analysis of murine endothelial cells (EC) and mesenchymal stem cells (MSC)</li> <li>Bulk RNA-seq analysis of human MSC samples</li> <li>Differential expression analyses (MAST-based)</li> <li>Gene set enrichment analyses (GSEA and ORA)</li> <li>Gene regulatory network inference (SCENIC)</li> <li>Ligand–receptor interaction analysis</li> <li>Interferon (IFN) signature scoring</li> <li>Scripts used to generate manuscript figures</li> </ul> <p>This version corresponds to the code used for the revised manuscript submission.</p> <p>The repository will be archived in Zenodo upon publication to obtain a citable DOI.</p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_18631631 |
| institution | Zenodo |
| language | |
| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | icenzano/NicheMGUSMM_2025: v1.0.0 – Initial submission version icenzano <p>Version 1.0.0 of the analysis code accompanying the manuscript:</p> <p>"Stromal and Endothelial Transcriptional Changes during MGUS-to-Myeloma Progression and Treatment Response."</p> <p>This release includes:</p> <ul> <li>Single-cell RNA-seq analysis of murine endothelial cells (EC) and mesenchymal stem cells (MSC)</li> <li>Bulk RNA-seq analysis of human MSC samples</li> <li>Differential expression analyses (MAST-based)</li> <li>Gene set enrichment analyses (GSEA and ORA)</li> <li>Gene regulatory network inference (SCENIC)</li> <li>Ligand–receptor interaction analysis</li> <li>Interferon (IFN) signature scoring</li> <li>Scripts used to generate manuscript figures</li> </ul> <p>This version corresponds to the code used for the revised manuscript submission.</p> <p>The repository will be archived in Zenodo upon publication to obtain a citable DOI.</p> |
| title | icenzano/NicheMGUSMM_2025: v1.0.0 – Initial submission version |
| url | https://doi.org/10.5281/zenodo.18631631 |