Copertina

Testing data set for a Snakemake differential and splicing isoform detection workflow based on ONT RNA-longseq data

Fuente: Zenodo

Salvato in:

Dettagli Bibliografici
Autore principale:	Meesters, Christian
Natura:	Recurso digital
Pubblicazione:	Zenodo 2026
Soggetti:	Bioinformatics Snakemake ONT Longseq Differential Expression Splicing Isoform Detection
Accesso online:	Acceder al recurso
Tags:	Aggiungi Tag Nessun Tag, puoi essere il primo ad aggiungerne!!

Documenti analoghi

Vitamin D elicits tissue-specific isoform expression in Atlantic salmon muscles.
di: Gorman, Courtney E, et al.
Pubblicazione: (2025)

Identification and functional regulation of three alternative splicing isoforms of the Ythdc2 gene in Miichthysmiiuy.
di: Zhu, Tongtong, et al.
Pubblicazione: (2025)

Identification and functional regulation of two alternative splicing isoforms of the Uhrf2 gene in Miichthysmiiuy.
di: Zhu, Xiangxiang, et al.
Pubblicazione: (2025)

RNA editing generates mRNA isoforms with distinct stabilities that may expand the thermal tolerance of mRNA and proteins in species.
di: Liao, Ming-Ling, et al.
Pubblicazione: (2025)

Full-Length Transcriptome of Testis and Ovary Provides Insights into Alternative Splicing During Gonadal Development in .
di: Wang, Youyan, et al.
Pubblicazione: (2025)

Complete genomes of 568 diverse Klebsiella pneumoniae species complex isolates from humans, animals and marine sources in Norway from 2001-2020
di: Hetland, Marit A. K., et al.
Pubblicazione: (2024)

Differential Expression of Na/K-ATPase α -Subunit Isoforms in Functionally Distinct Types of Ionocytes in the Gills of Mozambique Tilapia.
di: Miyanishi, Hiroshi, et al.
Pubblicazione: (2026)

Deletion of sf3b4 causes splicing defects and gene dysregulation that disrupt craniofacial development and survival.
di: Griffin, Casey, et al.
Pubblicazione: (2025)

Research on Cold Resistance of Transplanted to Zhoushan Area at the mRNA Level.
di: Li, Haozhe, et al.
Pubblicazione: (2025)

Integrative multi-omics analysis reveals the contribution of neoVTX genes to venom diversity of Synanceia verrucosa.
di: Zhang, Zhiwei, et al.
Pubblicazione: (2024)

Reproducible scRNA-seq PBMC Workflow: Reference, Toy Demonstration Data, and Analysis Outputs
di: Inkala, Simo
Pubblicazione: (2024)

Nanopore-Based Sequencing of the Full-Length Transcriptome of Male and Female Cleavage-Stage Embryos of the Chinese Mitten Crab ().
di: Han, Rui, et al.
Pubblicazione: (2024)

Zinc Finger Protein Znf296 Is a Cardiac-Specific Splicing Regulator Required for Cardiomyocyte Formation.
di: Li, Xianpeng, et al.
Pubblicazione: (2025)

Hybrid Algorithm for the detection of Pixel-based digital image forgery using Markov and SIFT descriptors
di: Jimmy Alexander Cortés-Osorio
Pubblicazione: (2022)

Clonación de genes por spliced leader a partir de genotecas de expresión de cisticercos de Taenia solium
di: Oswgladys Garrido
Pubblicazione: (2012)

Identification and Functional Analysis of a Key Gene in the CHH Gene Family for Glucose Metabolism in the Pacific White Shrimp .
di: Zhang, Chengyi, et al.
Pubblicazione: (2025)

Reprogramación del splicing alternativo de genes asociados a cáncer de mama
di: Kate Ariadna Rossano Gutiérrez
Pubblicazione: (2021)

Polymorphism-driven transcriptomic changes in anthelmintic metabolism pathways of Anisakis simplex s.s. L3 larvae.
di: Maździarz, Mateusz, et al.
Pubblicazione: (2025)

Functional study of RNA alternative splicing in zebrafish adaptation to low temperature.
di: Li, Jiazhen, et al.
Pubblicazione: (2026)

Single-cell mapping of alternative splicing linked to checkpoint immunotherapy response.
di: Xiong, Jieyi, et al.
Pubblicazione: (2025)

A COMPENDIUM OF MOUSE KNOCKOUTS WITH INNER EAR DEFECTS
di: ANAGNOSTOPOULOS, A. V
Pubblicazione: (2002)

Splice site diversity and abundance of noncanonical introns in diplonemids (Diplonemea, Euglenozoa).
di: Thakur, Prasoon K, et al.
Pubblicazione: (2025)

Isoform-specific phosphorylation of axonemal dynein heavy chains.
di: Sakato-Antoku, Miho, et al.
Pubblicazione: (2025)

Purificación y caracterización de la α-amilasa del hepatopáncreas de la langosta espinosa Panulirus argus (Latreille, 1804).
di: Casuso Cabrera, Antonio
Pubblicazione: (2016)

RNA-binding protein Rbm38 as a multifaceted post-transcriptional regulator in zebrafish pancreatic development.
di: Zhang, Xiangmin, et al.
Pubblicazione: (2026)

Natural compound plumbagin based inhibition of hIAPP revealed by Markov state models based on MD data along with experimental validations
di: Faisal Nabi, et al.
Pubblicazione: (2024)

A splice-site variant in the () gene identified in a symptomatic carrier woman.
di: Domoto, Aya, et al.
Pubblicazione: (2026)

Molecular basis for differential recognition of an allosteric inhibitor by receptor tyrosine kinases
di: Jyoti Verma, et al.
Pubblicazione: (2024)

Protein‐ RNA Docking Benchmark v3.0 Integrated With Binding Affinity
di: Shri Kant, et al.
Pubblicazione: (2025)

Blind Prediction of Complex Water and Ion Ensembles Around RNA in CASP16
di: Rachael C. Kretsch, et al.
Pubblicazione: (2025)

The interplay between epigenomic and transcriptomic variation during ecotype divergence in stickleback.
di: Luo, Man, et al.
Pubblicazione: (2025)

FTDMP: A Framework for Protein–Protein, Protein–DNA, and Protein–RNA Docking and Scoring
di: Kliment Olechnovič, et al.
Pubblicazione: (2025)

Distinct Substrate and Intermediate Recognition via Mutation Effects on Mycobacterium tuberculosis Methionyl‐ tRNA Synthetase
di: Shivani Thakur, et al.
Pubblicazione: (2025)

Enhancing RNA 3D Structure Prediction in CASP16 : Integrating Physics‐Based Modeling With Machine Learning for Improved Predictions
di: Sicheng Zhang, et al.
Pubblicazione: (2025)

ChatAlchemy: AI-enabled Chat Assistant For PharmAlchemy
di: Md Shifatul Ahsan, Apurba
Pubblicazione: (2025)

Genetic Control of Tissue Remodeling by a Non-Coding SNP in ITGA8 Explains Carotenoid-Based Color Polymorphism in Marine Mollusks.
di: Wei, Xiaohui, et al.
Pubblicazione: (2026)

Computational Environment for Genomic Sequencing and Annotation: a workflow for application in projects by life researchers
di: Matheus Pedron, Cassol
Pubblicazione: (2022)

Single-nucleus RNA sequencing reveals the underlying roadmap of early gonadal differentiation in teleost.
di: Wang, Jialin, et al.
Pubblicazione: (2026)

Primordial germ cell specification and early developmental cell states in Pacific oyster.
di: Gavery, Mackenzie R, et al.
Pubblicazione: (2025)

Molecular fingerprints of cell size sensing and mating type differentiation in pennate diatoms.
di: Belišová, Darja, et al.
Pubblicazione: (2025)