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2026
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| Accesso online: | https://doi.org/10.5281/zenodo.18851491 |
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| _version_ | 1866901918217928704 |
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| author | Yu, Zicheng |
| author_facet | Yu, Zicheng |
| contents | <p>=Raw Nanopore sequencing data of CD-pore-seq V1=</p> <p>==Author==<br>Zicheng Yu1, Zihao Chen1, Thomas C. Williams1,2, Craig J. Anderson1,3,4, Andrew P. Jackson1,*, Martin A.M. Reijns1,*, Martin S. Taylor1,*<br>1 MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, UK.<br>2 Child Life and Health, University of Edinburgh, UK.<br>3 German Cancer Research Center, Heidelberg, Germany<br>4 Department of Translational Oncology, German Cancer Research Center, Munich, Germany.</p> <p>* Correspondence should be addressed to andrew.jackson@ed.ac.uk, martin.reijns@ed.ac.uk and martin.taylor@ed.ac.uk</p> <p>==Citation==<br>'Generalised training for DNA modification detection by nanopore sequencing'</p> <p>==Description==<br>Nanopore sequencing data of libraries to train machine learning models to predict single DNA-embedded ribonucleotides.<br>Ligation kit: LSK-114 (all except for ygDNA) or SQK-NBD114.96 (ygDNA)<br>Flow-cell version: R10.4.1<br>Sequencing device: MinION or PromethION (./TelN/PromethION only)</p> <p>==UMI==<br>* Sequencing the UMI library (high-complexity randomers surrounding single DNA-embedded ribonucleotides) on a MinION flow-cell, with the second strand synthesised by the primer containing split 11nt UMIs.</p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_18851491 |
| institution | Zenodo |
| language | |
| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Raw Nanopore sequencing data of CD-pore-seq V1: UMI 1 Yu, Zicheng <p>=Raw Nanopore sequencing data of CD-pore-seq V1=</p> <p>==Author==<br>Zicheng Yu1, Zihao Chen1, Thomas C. Williams1,2, Craig J. Anderson1,3,4, Andrew P. Jackson1,*, Martin A.M. Reijns1,*, Martin S. Taylor1,*<br>1 MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, UK.<br>2 Child Life and Health, University of Edinburgh, UK.<br>3 German Cancer Research Center, Heidelberg, Germany<br>4 Department of Translational Oncology, German Cancer Research Center, Munich, Germany.</p> <p>* Correspondence should be addressed to andrew.jackson@ed.ac.uk, martin.reijns@ed.ac.uk and martin.taylor@ed.ac.uk</p> <p>==Citation==<br>'Generalised training for DNA modification detection by nanopore sequencing'</p> <p>==Description==<br>Nanopore sequencing data of libraries to train machine learning models to predict single DNA-embedded ribonucleotides.<br>Ligation kit: LSK-114 (all except for ygDNA) or SQK-NBD114.96 (ygDNA)<br>Flow-cell version: R10.4.1<br>Sequencing device: MinION or PromethION (./TelN/PromethION only)</p> <p>==UMI==<br>* Sequencing the UMI library (high-complexity randomers surrounding single DNA-embedded ribonucleotides) on a MinION flow-cell, with the second strand synthesised by the primer containing split 11nt UMIs.</p> |
| title | Raw Nanopore sequencing data of CD-pore-seq V1: UMI 1 |
| url | https://doi.org/10.5281/zenodo.18851491 |