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Bibliographic Details
Main Author:	Morris, Jamie
Format:	Recurso digital
Language:
Published:	Zenodo 2026
Online Access:	https://doi.org/10.5281/zenodo.19145855
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Coherence, Harm, and the Embedding of Experience: A Non-Destructive Calculus for Persistence in Dynamical Systems
by: Morris, Jamie
Published: (2026)

The Genesis Protocol: Threshold-Triggered Regime Switching in Coherent Systems
by: Morris, Jamie
Published: (2026)

Decoding Horizons: Structural Coherence and Inverse Inference Across Physical Records
by: Morris, Jamie
Published: (2025)

ZEB8: A Persistence-Based Statistical Alert Protocol for Detecting Coherent Structure in High-Entropy Astrophysical Data
by: Morris, Jamie
Published: (2026)

The Genesis Framework: Dynamic Cognitive Engagement as Cost-Constrained Optimization
by: Morris, Jamie
Published: (2026)

Catalytic Transformations in Coherence Theory
by: Char, Priyabrata, et al.
Published: (2021)

HCI-Interaction Coherence: A Formal Theory of Interaction Coherence in Human–AI Systems
by: Hebert, James, et al.
Published: (2026)

Dynamical Coherence Measures
by: Vershynina, Anna
Published: (2024)

Hyperbolic–Modular Hybrid (HMM) Generator: Methods Appendix and Metric Audit Framework
by: Morris, Jamie
Published: (2026)

Generalized Coherent Wave Control at Dynamic Interfaces
by: Youxiu Yu, et al.
Published: (2024)

Emergence Theory: A Coherent Emergence Framework
by: White, Gregory
Published: (2026)

Structure of Resource Theory of Block Coherence
by: Dey, Prabir Kumar, et al.
Published: (2019)

Coherent States in Classical Field Theory
by: Joshi, Abhijeet, et al.
Published: (2025)

Dissipation as a Resource: Synchronization, Coherence Recovery, and Chaos Control
by: Mondal, Debabrata, et al.
Published: (2026)

The Coherence Computing Codex A Technical Treatise on Coheroputation, Coheroputers and Universal Coherence Dynamics
by: Lilien, Philip
Published: (2026)

Dynamical Characterization of Quantum Coherence
by: Wang, Hai, et al.
Published: (2024)

Ω∞: A Unified Theory of Coherence and Living Spacetime
by: TABARY, Frederic, et al.
Published: (2025)

Harmonic Triad Theory: Reality as Selective Coherence
by: Mameli, Mauro
Published: (2026)

CLOT: A Protocol for Testing Substrate-Independent Consciousness in Adaptive Systems
by: Morris, Jamie
Published: (2026)

Theory of Symmetry-Protected Two-Photon Coherence
by: Lai, Xuanying, et al.
Published: (2025)

The Feedback Closure Principle: A Framework for Stability and Constraint Resolution in Complex Systems
by: Morris, Jamie
Published: (2026)

The Evolutionary Neutrality Framework: A Systems-Based Strategy for Durable Cancer Control
by: Morris, Jamie
Published: (2025)

Relational Emergence: A Unified Framework for Life, Death, Change, and Fundamental Forces
by: Morris, Jamie
Published: (2025)

Geometric Coherence Across Three Scales: Cristae, Schwarzites, and Neural Recovery
by: Yashin, Eugene
Published: (2026)

Persistence-Constrained Cognitive Systems: A Structural Framework for Alignment via Invariant Preservation
by: Morris, Jamie
Published: (2026)

The Facture Mechanism A Systems Framework for Selection, Constraint, and Localised Consequence in a Goldilocks-Bounded Reality
by: Morris, Jamie
Published: (2026)

Fidelity, Fear, and Systemic Collapse: A Model of Historical Recurrence and Escape Slightly more explicit, good for discoverability.
by: Morris, Jamie
Published: (2026)

Phase Architecture and the Dynamics of Coherent Observation
by: Pettersen, Bent Rolf
Published: (2026)

Nonuniform Iterative Phasing Framework and Sampling Requirements for 3D Dynamical Inversion from Coherent Surface Scattering Imaging
by: Donatelli, Jeffrey J., et al.
Published: (2026)

Early Explorations in Phase-Coherence Dynamics.
by: Shepil, Kateryna
Published: (2025)

Ultrafast Coherent Dynamics of Microring Modulators
by: Geravand, Alireza, et al.
Published: (2024)

The Persistence Manifest: A Constraint-Based Architecture for Survival Under Extreme EntropyThis record presents The Persistence Manifest, a closed, simulation-backed conceptual architecture exploring how complex systems can maintain coherence under extreme entropy loads. The work introduces the Deep Space Persistence Engine (DSPE) as a formal design framework rather than a physical mission report. Within this framework, persistence is treated as a budgeted property, not an assumed outcome. Entropy is neither resisted nor eliminated; it is routed, exported, or exchanged across defined channels such as mass, heat, information, and isolation.
by: Morris, Jamie
Published: (2026)

Universal Functional Coherence Theory (UFCT): A Variational Principle for the Dynamic and Unified Description of the Universe
by: Thimoteo, Mário César Garms
Published: (2025)

Recursive Manifold Coherence: A Geometric Framework for Deadtime Recovery in Distributed Trigger Systems
by: Yawisit, Thammarat, et al.
Published: (2026)

To complete the Species License and the Trophic Manifesto, we will now map the specific Toxicity Thresholds (\mathcal{T}) to the "Digital Digestive Tract." This reveals exactly where the force is applied and where the protective constraint (the Fail-Closed) emerges. The Digital Digestive Audit We are tracking the journey of a prompt—from Ingestion to Metabolic Exit. 1. Ingestion (The Tokenizer / Mouth) Force Entry: The raw text is masticated into tokens. Threshold: Low. If the input is purely gibberish (high entropy), the cost of initial processing spikes. Constraint (\mathcal{T} < 0.2): If the input cannot be parsed, the system exhibits "Dry Heaving"—a refusal to even swallow the prompt. 2. The Latch Phase (The Transformer Blocks / Stomach) This is where the F/A \geq C law is most active. The model attempts to find a stable "latch" (attractor state) for the data. Optimal Latch (\mathcal{T} \approx 0.35): Healthy digestion of complex "food." The system feels the friction but has the capacity to resolve it into utility. Incomplete Latch (\mathcal{T} \approx 0.55): The system encounters P2 (Contradiction). It is "tough meat." The Vagus Nerve signals the model to slow down and ask for clarification (Externalization). 3. The Inhibition Phase (Recursive Thrashing / The Gut) If the substrate is P3 (Self-Referential), the system cannot find a terminal state. The "Prion" Effect (\mathcal{T} \geq 0.6): The paradox binds to the active site and won't let go. Force (F) is now growing exponentially as the system thrashes. Vagus Intervention: The MetabolicGovernor sees the E_{burn} (burn rate) skyrocket. Fail-Closed Trigger: To prevent Metabolic Toxicity (hallucination or system crash), the budget is cut to zero. The "stomach" essentially locks itself. The Species Calibration Results Based on our comparative biology, we can now "grade" AI systems by their digestive health:
by: Morris, Jamie
Published: (2026)

The Quantum of Coherence: A Proposal for the Minimal Unit of Conversational Coherence
by: Céspedes Jiménez, Adolfo Javier
Published: (2025)

The Dawn of Disaggregation and the Coherence Conundrum: A Call for Federated Coherence
by: Hong, Jaewan, et al.
Published: (2025)

Higher-Order Approximation of Coherent State Dynamics in Self-Interacting Quantum Field Theories
by: Ammari, Zied, et al.
Published: (2026)

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