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2026
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| Online Access: | https://doi.org/10.5281/zenodo.19210918 |
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| _version_ | 1866901492129071104 |
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| author | Pardo Avila, Fatima von Heijne, Gunnar Kudva, Renuka |
| author_facet | Pardo Avila, Fatima von Heijne, Gunnar Kudva, Renuka |
| contents | <p><span>This repository contains the input files to run the MD simulations for </span></p> <p><span>"Single-residue effects on the behavior of a nascent polypeptide chain inside the ribosome exit tunnel"</span></p> <p> </p> <p><span>The main simulations described in the manuscript are available in the "ModelsBasedOn3JBU" folder. </span></p> <p><span>For each system (G, K, N, and Control), there is a folder containing the input files. </span></p> <p> </p> <p><span>The input files for the test system, built based on <em>8qoa</em>, but using the SecM(Ms) sequence, can be found </span></p> <p><span>in the "ModelsBasedOn8QOA" folder.</span></p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_19210918 |
| institution | Zenodo |
| language | |
| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Input Files for Molecular Dynamics of E. coli Ribosome Stalled by SecM(Ms) Pardo Avila, Fatima von Heijne, Gunnar Kudva, Renuka <p><span>This repository contains the input files to run the MD simulations for </span></p> <p><span>"Single-residue effects on the behavior of a nascent polypeptide chain inside the ribosome exit tunnel"</span></p> <p> </p> <p><span>The main simulations described in the manuscript are available in the "ModelsBasedOn3JBU" folder. </span></p> <p><span>For each system (G, K, N, and Control), there is a folder containing the input files. </span></p> <p> </p> <p><span>The input files for the test system, built based on <em>8qoa</em>, but using the SecM(Ms) sequence, can be found </span></p> <p><span>in the "ModelsBasedOn8QOA" folder.</span></p> |
| title | Input Files for Molecular Dynamics of E. coli Ribosome Stalled by SecM(Ms) |
| url | https://doi.org/10.5281/zenodo.19210918 |