Oblique Subduction Model Script (Japan Sea Openning Paper) - Underworld2

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Hauptverfasser: Luo, Peigen, Li, Zhong-Hai
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Sprache:Englisch
Veröffentlicht: Zenodo 2026
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author Luo, Peigen
Li, Zhong-Hai
author_facet Luo, Peigen
Li, Zhong-Hai
contents <p>This repository contains the numerical modelling code used in:</p> <p>"Transient Acceleration and Termination of Japan Sea Opening Controlled by Oblique Subduction Induced Slab Window and Mantle Flow"</p> <p>Model description:<br>- A 3D visco-plastic mechanical model of oblique subduction implemented using Underworld2<br>- The model includes subduction slab, overriding plate, and weakzone structures</p> <p>Additional notes on model setup:<br>- All model geometry, physical parameters, and Underworld2 runtime configurations are defined within a single script.<br>- Different scripts correspond to models with different obliquity angles (45°, 30°, 15°, and 0°), while all other parameters are kept identical.<br>- This suite of experiments is designed as a single-variable test, where only the obliquity angle varies between models.<br>- To test additional angles, users can modify the parameter “ang” in the script.</p> <p>How to run:<br>- Requires Underworld2 (version 2.10 or later) with MPI support<br>- Run the model using:<br>  sbatch Run_Cluster.sh<br>- Note: Minor modifications to the submission script may be required depending on the HPC system</p> <p>Outputs:<br>- Outputs are automatically generated to the output directory when reproducing the model<br>- Time evolution of Vrms is recorded in FrequentOutput.dat</p> <p>Visualisation-paraview:<br>- Output files are organised in XMF format, where all timesteps are referenced in a single .xmf file (e.g., XDMF.field.00XX.xmf)<br>- Users can directly open the .xmf file in ParaView to visualise the full set of model fields (e.g., velocity, strain rate, viscosity, density)<br>- No additional data processing is required</p> <p>Alternative visualisation (Underworld built-in):<br>- For users who are not familiar with ParaView, a simple visualisation workflow is provided using Underworld's built-in visualisation module (Visual_UW.py).<br>- The example script demonstrates how to render material distributions directly from the model swarm.</p> <p>Additional data for figure reproduction:<br>- Supplementary data files (e.g., data_age.txt, data_rate.txt, Fast_Line.csv, Middle_Line.csv, Slow_Line.csv) are provided to reproduce the figures presented in the manuscript.</p> <p>Note:<br>Due to the large size of the full simulation outputs, they are not archived in this repository. All results presented in the manuscript can be reproduced using the provided code and model setup.</p>
format Recurso digital
id zenodo_https___doi_org_10_5281_zenodo_19230232
institution Zenodo
language eng
publishDate 2026
publisher Zenodo
record_format zenodo
spellingShingle Oblique Subduction Model Script (Japan Sea Openning Paper) - Underworld2
Luo, Peigen
Li, Zhong-Hai
<p>This repository contains the numerical modelling code used in:</p> <p>"Transient Acceleration and Termination of Japan Sea Opening Controlled by Oblique Subduction Induced Slab Window and Mantle Flow"</p> <p>Model description:<br>- A 3D visco-plastic mechanical model of oblique subduction implemented using Underworld2<br>- The model includes subduction slab, overriding plate, and weakzone structures</p> <p>Additional notes on model setup:<br>- All model geometry, physical parameters, and Underworld2 runtime configurations are defined within a single script.<br>- Different scripts correspond to models with different obliquity angles (45°, 30°, 15°, and 0°), while all other parameters are kept identical.<br>- This suite of experiments is designed as a single-variable test, where only the obliquity angle varies between models.<br>- To test additional angles, users can modify the parameter “ang” in the script.</p> <p>How to run:<br>- Requires Underworld2 (version 2.10 or later) with MPI support<br>- Run the model using:<br>  sbatch Run_Cluster.sh<br>- Note: Minor modifications to the submission script may be required depending on the HPC system</p> <p>Outputs:<br>- Outputs are automatically generated to the output directory when reproducing the model<br>- Time evolution of Vrms is recorded in FrequentOutput.dat</p> <p>Visualisation-paraview:<br>- Output files are organised in XMF format, where all timesteps are referenced in a single .xmf file (e.g., XDMF.field.00XX.xmf)<br>- Users can directly open the .xmf file in ParaView to visualise the full set of model fields (e.g., velocity, strain rate, viscosity, density)<br>- No additional data processing is required</p> <p>Alternative visualisation (Underworld built-in):<br>- For users who are not familiar with ParaView, a simple visualisation workflow is provided using Underworld's built-in visualisation module (Visual_UW.py).<br>- The example script demonstrates how to render material distributions directly from the model swarm.</p> <p>Additional data for figure reproduction:<br>- Supplementary data files (e.g., data_age.txt, data_rate.txt, Fast_Line.csv, Middle_Line.csv, Slow_Line.csv) are provided to reproduce the figures presented in the manuscript.</p> <p>Note:<br>Due to the large size of the full simulation outputs, they are not archived in this repository. All results presented in the manuscript can be reproduced using the provided code and model setup.</p>
title Oblique Subduction Model Script (Japan Sea Openning Paper) - Underworld2
url https://doi.org/10.5281/zenodo.19230232