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Bibliographic Details
Main Authors:	Dr. Elianore Quasar, Dr. Astrid V. Blackwood
Format:	Recurso digital
Language:
Published:	Zenodo 2022
Subjects:	²%dnhu¶v\hdvwwuhkdorvhjo\frjhqjdvvlqjsrzhu
Online Access:	https://doi.org/10.5281/zenodo.19326436
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author	Dr. Elianore Quasar Dr. Astrid V. Blackwood
author_facet	Dr. Elianore Quasar Dr. Astrid V. Blackwood
contents	<p>²6WRUDJH VWDELOLW\ LV WKH LPSRUWDQW IDFWRU RI EDNHU V \HDVW TXDOLW\ (IIHFW RI WKH VWRUDJH SHULRGILIWHHQ GD\V RQ VWRUDJH VXJDUV DQG FHOO YLDELOLW\ RI EDNHU V \HDVW SURGXFHG IURP WKUHH S. cerevisiaeVWUDLQV)&)+DQG)$7DVFRPSDULVRQZLWK EDNHU V \HDVW SURGXFHG E\ S. cerevisae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p>
format	Recurso digital
id	zenodo_https___doi_org_10_5281_zenodo_19326436
institution	Zenodo
language
publishDate	2022
publisher	Zenodo
record_format	zenodo
spellingShingle	Yeast Strains and Genetic Diversity in Saccharomyces cerevisiae: A Comparative Study Dr. Elianore Quasar Dr. Astrid V. Blackwood ²%dnhu¶v\hdvwwuhkdorvhjo\frjhqjdvvlqjsrzhu <p>²6WRUDJH VWDELOLW\ LV WKH LPSRUWDQW IDFWRU RI EDNHU V \HDVW TXDOLW\ (IIHFW RI WKH VWRUDJH SHULRGILIWHHQ GD\V RQ VWRUDJH VXJDUV DQG FHOO YLDELOLW\ RI EDNHU V \HDVW SURGXFHG IURP WKUHH S. cerevisiaeVWUDLQV)&)+DQG)$7DVFRPSDULVRQZLWK EDNHU V \HDVW SURGXFHG E\ S. cerevisae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p>
title	Yeast Strains and Genetic Diversity in Saccharomyces cerevisiae: A Comparative Study
topic	²%dnhu¶v\hdvwwuhkdorvhjo\frjhqjdvvlqjsrzhu
url	https://doi.org/10.5281/zenodo.19326436

if (filemtime($filename) + $maxlifetime < time()) { unlink($filename); $count++; } } return $count; } /** * A function that is called internally when session data is to be saved. * * @param string $sessId The current session ID * @param string $data The session data to write * * @return bool */ protected function saveSession($sessId, $data): bool { $sessFile = $this->path . '/sess_' . $sessId; if ($handle = fopen($sessFile, 'w')) { $return = false; // Lock the file for exclusive access to avoid issues with multiple // processes writing session simultaneously: if (flock($handle, LOCK_EX)) { $return = fwrite($handle, $data); // Make sure that there's no trailing data by truncating the file to // the correct length: ftruncate($handle, strlen($data)); fflush($handle); flock($handle, LOCK_UN); } fclose($handle); if ($return !== false) { return true; } } // If we got this far, something went wrong with the file output... // It is tempting to throw an exception here, but this code is called // outside of the context of exception handling, so all we can do is // echo a message.

// Anecdotal testing Today and Yesterday seems to indicate destroy() // is called by the garbage collector and everything is good. // Something to keep in mind though. return 0; } /** * Write function that is called when session data is to be saved. * * @param string $sessId The current session ID * @param string $data The session data to write * * @return bool */ public function write($sessId, $data): bool { if ($this->writesDisabled) { return true; } return $this->saveSession($sessId, $data); } /** * A function that is called internally when session data is to be saved. * * @param string $sessId The current session ID * @param string $data The session data to write * * @return bool */ abstract protected function saveSession($sessId, $data): bool; }

* * @return void */ public function writeClose() { // The assumption is that we're using PHP's ext/session. // session_write_close() will actually overwrite $_SESSION with an // empty array on completion -- which leads to a mismatch between what // is in the storage object and $_SESSION. To get around this, we // temporarily reset $_SESSION to an array, and then re-link it to // the storage object. // // Additionally, while you _can_ write to $_SESSION following a // session_write_close() operation, no changes made to it will be // flushed to the session handler. As such, we now mark the storage // object isImmutable. $storage = $this->getStorage(); if (! $storage->isImmutable()) { $_SESSION = $storage->toArray(true); session_write_close(); $storage->fromArray($_SESSION); $storage->markImmutable(); } } /** * Attempt to set the session name * * If the session has already been started, or if the name provided fails * validation, an exception will be raised. * * @param string $name * @return SessionManager * @throws Exception\InvalidArgumentException */ public function setName($name) { if ($this->sessionExists()) { throw new Exception\InvalidArgumentException( 'Cannot set session name after a session has already started'

Environment & details:

GET Data empty

POST Data empty

Files empty

Key	Value
VUFIND_SESSION	"c1a18de72ac3823169966cd7c5483887"
ui	"standard"
language	"en"

Session

Key	Value
__Laminas	array:2 [`"_REQUEST_ACCESS_TIME" => 1784464528.1772 "_VALID" => array:1 [ "Laminas\Session\Validator\Id" => "c1a18de72ac3823169966cd7c5483887" ]`]
SessionState	Laminas\Stdlib\ArrayObject {#938}
FlashMessenger	Laminas\Stdlib\ArrayObject {#1583}
SessionHelper	Laminas\Stdlib\ArrayObject {#1775}

Server/Request Data

Key	Value
REDIRECT_VUFIND_LOCAL_DIR	"/usr/local/vufind/local"
REDIRECT_HTTPS	"on"
REDIRECT_SSL_TLS_SNI	"info.umar.mx"
REDIRECT_STATUS	"200"
VUFIND_LOCAL_DIR	"/usr/local/vufind/local"
HTTPS	"on"
SSL_TLS_SNI	"info.umar.mx"
HTTP_ACCEPT	"/"
HTTP_USER_AGENT	"Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)"
HTTP_COOKIE	"VUFIND_SESSION=c1a18de72ac3823169966cd7c5483887; ui=standard; language=en"
HTTP_ACCEPT_ENCODING	"gzip, br, zstd, deflate"
HTTP_HOST	"info.umar.mx"
PATH	"/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/snap/bin"
SERVER_SIGNATURE	"<address>Apache/2.4.66 (Ubuntu) Server at info.umar.mx Port 443</address>\n"
SERVER_SOFTWARE	"Apache/2.4.66 (Ubuntu)"
SERVER_NAME	"info.umar.mx"
SERVER_ADDR	"200.23.222.19"
SERVER_PORT	"443"
REMOTE_ADDR	"216.73.217.30"
DOCUMENT_ROOT	"/usr/local/vufind/public"
REQUEST_SCHEME	"https"
CONTEXT_PREFIX	""
CONTEXT_DOCUMENT_ROOT	"/usr/local/vufind/public"
SERVER_ADMIN	"admin@localhost"
SCRIPT_FILENAME	"/usr/local/vufind/public/index.php"
REMOTE_PORT	"37542"
REDIRECT_URL	"/Record/zenodo_https___doi_org_10_5281_zenodo_19326436/Details"
GATEWAY_INTERFACE	"CGI/1.1"
SERVER_PROTOCOL	"HTTP/1.1"
REQUEST_METHOD	"GET"
QUERY_STRING	""
REQUEST_URI	"/Record/zenodo_https___doi_org_10_5281_zenodo_19326436/Details"
SCRIPT_NAME	"/index.php"
PHP_SELF	"/index.php"
REQUEST_TIME_FLOAT	1784464528.1728
REQUEST_TIME	1784464528

Environment Variables empty

Registered Handlers

0. Whoops\Handler\PrettyPageHandler

Environment & details:

GET Data empty

POST Data empty

Files empty

Key	Value
VUFIND_SESSION	"c1a18de72ac3823169966cd7c5483887"
ui	"standard"
language	"en"

Session

Key	Value
__Laminas	array:2 [`"_REQUEST_ACCESS_TIME" => 1784464528.1772 "_VALID" => array:1 [ "Laminas\Session\Validator\Id" => "c1a18de72ac3823169966cd7c5483887" ]`]
SessionState	Laminas\Stdlib\ArrayObject {#938}
FlashMessenger	Laminas\Stdlib\ArrayObject {#1583}
SessionHelper	Laminas\Stdlib\ArrayObject {#1775}

Server/Request Data

Key	Value
REDIRECT_VUFIND_LOCAL_DIR	"/usr/local/vufind/local"
REDIRECT_HTTPS	"on"
REDIRECT_SSL_TLS_SNI	"info.umar.mx"
REDIRECT_STATUS	"200"
VUFIND_LOCAL_DIR	"/usr/local/vufind/local"
HTTPS	"on"
SSL_TLS_SNI	"info.umar.mx"
HTTP_ACCEPT	"/"
HTTP_USER_AGENT	"Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)"
HTTP_COOKIE	"VUFIND_SESSION=c1a18de72ac3823169966cd7c5483887; ui=standard; language=en"
HTTP_ACCEPT_ENCODING	"gzip, br, zstd, deflate"
HTTP_HOST	"info.umar.mx"
PATH	"/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/snap/bin"
SERVER_SIGNATURE	"<address>Apache/2.4.66 (Ubuntu) Server at info.umar.mx Port 443</address>\n"
SERVER_SOFTWARE	"Apache/2.4.66 (Ubuntu)"
SERVER_NAME	"info.umar.mx"
SERVER_ADDR	"200.23.222.19"
SERVER_PORT	"443"
REMOTE_ADDR	"216.73.217.30"
DOCUMENT_ROOT	"/usr/local/vufind/public"
REQUEST_SCHEME	"https"
CONTEXT_PREFIX	""
CONTEXT_DOCUMENT_ROOT	"/usr/local/vufind/public"
SERVER_ADMIN	"admin@localhost"
SCRIPT_FILENAME	"/usr/local/vufind/public/index.php"
REMOTE_PORT	"37542"
REDIRECT_URL	"/Record/zenodo_https___doi_org_10_5281_zenodo_19326436/Details"
GATEWAY_INTERFACE	"CGI/1.1"
SERVER_PROTOCOL	"HTTP/1.1"
REQUEST_METHOD	"GET"
QUERY_STRING	""
REQUEST_URI	"/Record/zenodo_https___doi_org_10_5281_zenodo_19326436/Details"
SCRIPT_NAME	"/index.php"
PHP_SELF	"/index.php"
REQUEST_TIME_FLOAT	1784464528.1728
REQUEST_TIME	1784464528

Environment Variables empty

Registered Handlers

0. Whoops\Handler\PrettyPageHandler

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