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2026
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| Online Access: | https://doi.org/10.5281/zenodo.19712774 |
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| _version_ | 1866901699552083968 |
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| author | Salnikov, Lev Saveli Goldberg Eugene Pinsky |
| author_facet | Salnikov, Lev Saveli Goldberg Eugene Pinsky |
| contents | <p>Python scripts reproducing the quantitative results of the manuscript<br>"Housekeeping Genes as the Cellular Maintenance Layer of Ontogenesis and Aging"<br>(Salnikov, Goldberg, Pinsky; submitted).</p> <p>Contents: seven analysis scripts corresponding one-to-one to Tables 3–7 of<br>the manuscript, plus paralog retrieval from Ensembl BioMart and a README.<br>Input files are publicly available from the Alliance of Genome Resources<br>(r7.2), Ensembl BioMart (r113), Tabula Sapiens v1, GTEx Portal v10, and<br>the Gómez Ortega et al. MaxToki dataset.</p> <p>Runtime: Python >=3.10. Pinned dependency versions (pandas 2.3.3, numpy 2.4.4,<br>scipy 1.17.1, anndata 0.12.10, scanpy 1.12, h5py 3.16.0, requests 2.33.1,<br>openpyxl 3.1.5) in requirements.txt.</p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_19712774 |
| institution | Zenodo |
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| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | HG Analysis Scripts v1.0 — Code for "Housekeeping Genes as the Cellular Maintenance Layer of Ontogenesis and Aging" Salnikov, Lev Saveli Goldberg Eugene Pinsky <p>Python scripts reproducing the quantitative results of the manuscript<br>"Housekeeping Genes as the Cellular Maintenance Layer of Ontogenesis and Aging"<br>(Salnikov, Goldberg, Pinsky; submitted).</p> <p>Contents: seven analysis scripts corresponding one-to-one to Tables 3–7 of<br>the manuscript, plus paralog retrieval from Ensembl BioMart and a README.<br>Input files are publicly available from the Alliance of Genome Resources<br>(r7.2), Ensembl BioMart (r113), Tabula Sapiens v1, GTEx Portal v10, and<br>the Gómez Ortega et al. MaxToki dataset.</p> <p>Runtime: Python >=3.10. Pinned dependency versions (pandas 2.3.3, numpy 2.4.4,<br>scipy 1.17.1, anndata 0.12.10, scanpy 1.12, h5py 3.16.0, requests 2.33.1,<br>openpyxl 3.1.5) in requirements.txt.</p> |
| title | HG Analysis Scripts v1.0 — Code for "Housekeeping Genes as the Cellular Maintenance Layer of Ontogenesis and Aging" |
| url | https://doi.org/10.5281/zenodo.19712774 |