Immunodynamics-Engel-Lab/lmd-imageanalysis: v1.0.0 - LMD Segmentation Workflow
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2026
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| _version_ | 1866902188567035904 |
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| author | Devon Siemes |
| author_facet | Devon Siemes |
| contents | <h3> Key Features</h3> <ul> <li><strong>Cellpose-SAM segmentation</strong> for cell detection.</li> <li><strong>FFT-based template matching</strong> for fiducial detection.</li> <li><strong>pyLMD integration</strong> for boundary detection, XML export and Leica LMD software compatibility.</li> <li><strong>Pixi-based environment</strong> for reproducible setup.</li> </ul> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_20067090 |
| institution | Zenodo |
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| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Immunodynamics-Engel-Lab/lmd-imageanalysis: v1.0.0 - LMD Segmentation Workflow Devon Siemes <h3> Key Features</h3> <ul> <li><strong>Cellpose-SAM segmentation</strong> for cell detection.</li> <li><strong>FFT-based template matching</strong> for fiducial detection.</li> <li><strong>pyLMD integration</strong> for boundary detection, XML export and Leica LMD software compatibility.</li> <li><strong>Pixi-based environment</strong> for reproducible setup.</li> </ul> |
| title | Immunodynamics-Engel-Lab/lmd-imageanalysis: v1.0.0 - LMD Segmentation Workflow |
| url | https://doi.org/10.5281/zenodo.20067090 |