| _version_ | 1866901665645330432 |
|---|---|
| author | Teresa de Lisieux |
| author_facet | Teresa de Lisieux |
| contents | <p>This repository contains the bioinformatic workflow, processed data, statistical analyses, and publication-ready figures associated with oral metagenomic analyses of antimicrobial resistance genes in periodontitis and healthy samples.</p> <p>Pipeline components include:</p> <ul> <li>Quality control with FastQC and fastp</li> <li>Metagenome assembly with MEGAHIT</li> <li>Gene prediction with Prodigal</li> <li>ARG screening using ABRicate and CARD</li> <li>Statistical analyses and figure generation in R</li> </ul> <p>The repository was developed to ensure reproducibility and open science practices for metagenomic resistome studies.</p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_20146543 |
| institution | Zenodo |
| language | |
| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | TeresaLobo/oral-resistome-metagenomics: First release – oral resistome metagenomics Teresa de Lisieux <p>This repository contains the bioinformatic workflow, processed data, statistical analyses, and publication-ready figures associated with oral metagenomic analyses of antimicrobial resistance genes in periodontitis and healthy samples.</p> <p>Pipeline components include:</p> <ul> <li>Quality control with FastQC and fastp</li> <li>Metagenome assembly with MEGAHIT</li> <li>Gene prediction with Prodigal</li> <li>ARG screening using ABRicate and CARD</li> <li>Statistical analyses and figure generation in R</li> </ul> <p>The repository was developed to ensure reproducibility and open science practices for metagenomic resistome studies.</p> |
| title | TeresaLobo/oral-resistome-metagenomics: First release – oral resistome metagenomics |
| url | https://doi.org/10.5281/zenodo.20146543 |