Reproducibility package for integrative public-resource transcriptomic re-analysis of diabetic kidney disease
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| Natura: | Recurso digital |
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Zenodo
2026
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| _version_ | 1866901695728975872 |
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| author | Zhu, Qunyi Jiang, Chenyang Chu, Kaixuan Fan, Yuyun Guan, Chong Wang, Guangze |
| author_facet | Zhu, Qunyi Jiang, Chenyang Chu, Kaixuan Fan, Yuyun Guan, Chong Wang, Guangze |
| contents | <p>This repository contains analysis scripts, processed summary outputs, software/session logs, source-to-table audit records, and supplementary tables supporting the manuscript entitled "Integrative public-resource transcriptomic re-analysis maps injured proximal tubule-myeloid-ECM/stromal communication programs in diabetic kidney disease."</p> <p>Raw public datasets GSE209781, GSE30529, GSE142025, GSE195460, and GSE211785 are publicly available from the Gene Expression Omnibus. This package does not contain newly generated human participant data or redistributed raw human sequencing data.</p> <p>L1000CDS2, HERB, and ETCM were used only as supplementary contextual resources. The analysis is support-level transcriptomic re-analysis and does not provide causal, clinical, therapeutic, or drug-discovery validation.</p> |
| format | Recurso digital |
| id | zenodo_https___doi_org_10_5281_zenodo_20225908 |
| institution | Zenodo |
| language | |
| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | Reproducibility package for integrative public-resource transcriptomic re-analysis of diabetic kidney disease Zhu, Qunyi Jiang, Chenyang Chu, Kaixuan Fan, Yuyun Guan, Chong Wang, Guangze diabetic kidney disease DKD single-cell RNA-seq single-nucleus RNA-seq transcriptomics proximal tubule macrophage extracellular matrix ligand-receptor analysis reproducibility package <p>This repository contains analysis scripts, processed summary outputs, software/session logs, source-to-table audit records, and supplementary tables supporting the manuscript entitled "Integrative public-resource transcriptomic re-analysis maps injured proximal tubule-myeloid-ECM/stromal communication programs in diabetic kidney disease."</p> <p>Raw public datasets GSE209781, GSE30529, GSE142025, GSE195460, and GSE211785 are publicly available from the Gene Expression Omnibus. This package does not contain newly generated human participant data or redistributed raw human sequencing data.</p> <p>L1000CDS2, HERB, and ETCM were used only as supplementary contextual resources. The analysis is support-level transcriptomic re-analysis and does not provide causal, clinical, therapeutic, or drug-discovery validation.</p> |
| title | Reproducibility package for integrative public-resource transcriptomic re-analysis of diabetic kidney disease |
| topic | diabetic kidney disease DKD single-cell RNA-seq single-nucleus RNA-seq transcriptomics proximal tubule macrophage extracellular matrix ligand-receptor analysis reproducibility package |
| url | https://doi.org/10.5281/zenodo.20225908 |