Imagen de Portada

OMSF Symposium Demo: OpenFE binding affinity calculations from OpenFold3 generated structures

Fuente: Zenodo

Guardado en:

Detalles Bibliográficos
Autor principal:	Travitz, Alyssa
Formato:	Recurso digital
Publicado:	Zenodo 2026
Acceso en línea:	Acceder al recurso
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

Ejemplares similares

OpenFE Update January 2025
por: Alibay, Irfan, et al.
Publicado: (2025)

ConforNets: Latents-Based Conformational Control in OpenFold3
por: Lee, Minji, et al.
Publicado: (2026)

Quantifying the Role of OpenFold Components in Protein Structure Prediction
por: Hayes, Tyler L., et al.
Publicado: (2025)

OpenFE 2024 Industry Benchmarking Project, Results from Janssen, private sets
por: Gapsys, Vytautas
Publicado: (2025)

OpenFE 2024 Industry Benchmarking Project, Results from Boehringer Ingelheim, jacs_set jnk1 & ptpb1, charge_annihilation_set egfr, scaffold_hopping factor_xa
por: Ries, Benjamin, et al.
Publicado: (2025)

TPack: OpenTelemetry Demo trace dataset
por: Chin, Yen-Ru
Publicado: (2026)

Yield Prediction Model - Open Source Demo
por: Bogdanov, Evgeny, et al.
Publicado: (2025)

Fluorescent protein structures generated by AlphaFold3.
por: Nam, Ki Hyun
Publicado: (2025)

Demo: Secure Edge Server for Network Slicing and Resource Allocation in Open RAN
por: Alchaab, Adhwaa, et al.
Publicado: (2025)

3rd Open Science Symposium: The Path to EOSC: Next Steps
por: Tziveloglou, Pantelis, et al.
Publicado: (2024)

Open WDVV Equations and Frobenius Structures for Toric Calabi-Yau 3-Folds
por: Yu, Song, et al.
Publicado: (2023)

Evaluating Asynchronous Semantics in Trace-Discovered Resilience Models: A Case Study on the OpenTelemetry Demo
por: Krasnovsky, Anatoly A.
Publicado: (2025)

On Creativity and Open-Endedness
por: Soros, L. B., et al.
Publicado: (2024)

An Open-Source 3D FE Quench Simulation Tool for No-Insulation HTS Pancake Coils
por: Atalay, Sina, et al.
Publicado: (2023)

The binding affinity‐dependent inhibition of cell growth and viability by DNA sulfur‐binding domains
por: Yuli Wang, et al.
Publicado: (2024)

Structural insights into the fusion of annexin A5 and fluorescent proteins generating hundredfold differentiated binding affinities to phosphatidylserine
por: Mengyue Gao, et al.
Publicado: (2025)

Open-loop control design for contraction in affine nonlinear systems
por: Arkhis, Mohamed Yassine, et al.
Publicado: (2025)

Synergy of machine learning and density functional theory calculations for predicting experimental Lewis base affinity and Lewis polybase binding atoms
por: Hieu Huynh, et al.
Publicado: (2024)

Improving generalisability of 3D binding affinity models in low data regimes
por: Buhmann, Julia, et al.
Publicado: (2024)

Demo upload
por: Anonymous
Publicado: (2026)

Capacity Assessment of Latin American and Caribbean Partners: A Symposium about Open-Access, Technological Needs, and Institutional Sustainability. Report of Symposium and Recommendations
por: St. Hubert, Hadassah, et al.
Publicado: (2021)

FoldToken2: Learning compact, invariant and generative protein structure language
por: Gao, Zhangyang, et al.
Publicado: (2024)

Revolutionizing structural biology: AI-driven protein structure prediction from AlphaFold to next-generation innovations.
por: Thangamalai, Mowna Sundari, et al.
Publicado: (2025)

Persistent local Laplacian prediction of protein-ligand binding affinities
por: Liu, Jian, et al.
Publicado: (2026)

Mayer-homology learning prediction of protein-ligand binding affinities
por: Feng, Hongsong, et al.
Publicado: (2024)

Improved prediction of ligand-protein binding affinities by meta-modeling
por: Lee, Ho-Joon, et al.
Publicado: (2023)

Systematic evaluation of computational tools to predict the effects of mutations on protein-ligand binding affinity in the absence of experimental structures
por: Pan, Qisheng
Publicado: (2025)

Systematic evaluation of computational tools to predict the effects of mutations on protein-ligand binding affinity in the absence of experimental structures
por: Pan, Qisheng
Publicado: (2025)

AlphaFold‐driven discovery of oxysterol‐binding protein ‐ related protein‐phosphoinositide 3‐, 4‐, and 5‐phosphatase interactions using new generation confidence scores
por: Filippo Dall'Armellina, et al.
Publicado: (2026)

Exploring the potential of AlphaFold distograms for predicting binding‐induced hinge motions
por: Büşra Savaş, et al.
Publicado: (2026)

ERL‐ProLiGraph: Enhanced representation learning on protein‐ligand graph structured data for binding affinity prediction
por: Gloria Geine Paendong, et al.
Publicado: (2024)

OpenAI for OpenAPI: Automated generation of REST API specification via LLMs
por: Chen, Hao, et al.
Publicado: (2026)

TopoTB: A software package for calculating the electronic structure and topological properties of the tight-binding model
por: Huang, Xinliang, et al.
Publicado: (2024)

An Open-Ended Approach to Understanding Local, Emergent Conservation Laws in Biological Evolution
por: Adams, Alyssa M, et al.
Publicado: (2024)

Many-body theory calculations of positron binding to parabenzoquinone
por: Gregg, S. K., et al.
Publicado: (2025)

SG‐ML‐PLAP: A structure‐guided machine learning–based scoring function for protein–ligand binding affinity prediction
por: Sapna Pal, et al.
Publicado: (2024)

GenShin:geometry-enhanced structural graph embodies binding pose can better predicting compound-protein interaction affinity
por: Zhu, Pingfei, et al.
Publicado: (2025)

Demo 3 : Echoscope 1600 [Recurso electrónico] / Omnitech as
por: OmniTech as

Accurate and generalizable protein-ligand binding affinity prediction with geometric deep learning
por: Li, Krinos, et al.
Publicado: (2025)

Unlocking GPCR–ligand interactions: Measuring binding affinities with thermal shift assay
por: Dmitrii Dashevskii, et al.
Publicado: (2025)