ssj-ode3aif/3aif-ode-model: v7.7.0 — npj SBA revision (Eq. 1-6 implementation)
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2026
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| _version_ | 1866902271062704128 |
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| author | ssj-ode3aif |
| author_facet | ssj-ode3aif |
| contents | <p>Revised manuscript submission to npj Systems Biology and Applications (May 2026).</p> <p>This release implements Eq. (1)–(6) of the v7.7 manuscript exactly, including:</p> <ul> <li>Hill cross-axis switches (n_axis = 3, K_hill = 0.40)</li> <li>Basal production terms T0, R0, M0</li> <li>Tolerance self-amplification nuT<em>H_up(T)</em>R*(1-T)</li> <li>Bounded (1-D), (1-S) cross-axis terms ensuring DI ∈ [0,1]</li> </ul> <p>Verified to reproduce:</p> <ul> <li>Healthy attractor (T=0.99, D=0.001, S=0.06, E=0.98, R=0.95, M=1.00)</li> <li>Disease attractor (T=0.47, D=0.71, S=0.31, E=0.43, R=0.64, M=0.33)</li> <li>Top-3 sensitivity parameters: beta2, gamma2, beta2e (all in Axis 2 / NAM)</li> </ul> <p>Citation: Jung S. Bistable attractor dynamics in difficult-to-treat rheumatic disease: a multi-axis ODE framework with cross-disease transcriptomic consistency analysis. npj Systems Biology and Applications (under review, 2026).</p> |
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| id | zenodo_https___doi_org_10_5281_zenodo_20406029 |
| institution | Zenodo |
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| publishDate | 2026 |
| publisher | Zenodo |
| record_format | zenodo |
| spellingShingle | ssj-ode3aif/3aif-ode-model: v7.7.0 — npj SBA revision (Eq. 1-6 implementation) ssj-ode3aif <p>Revised manuscript submission to npj Systems Biology and Applications (May 2026).</p> <p>This release implements Eq. (1)–(6) of the v7.7 manuscript exactly, including:</p> <ul> <li>Hill cross-axis switches (n_axis = 3, K_hill = 0.40)</li> <li>Basal production terms T0, R0, M0</li> <li>Tolerance self-amplification nuT<em>H_up(T)</em>R*(1-T)</li> <li>Bounded (1-D), (1-S) cross-axis terms ensuring DI ∈ [0,1]</li> </ul> <p>Verified to reproduce:</p> <ul> <li>Healthy attractor (T=0.99, D=0.001, S=0.06, E=0.98, R=0.95, M=1.00)</li> <li>Disease attractor (T=0.47, D=0.71, S=0.31, E=0.43, R=0.64, M=0.33)</li> <li>Top-3 sensitivity parameters: beta2, gamma2, beta2e (all in Axis 2 / NAM)</li> </ul> <p>Citation: Jung S. Bistable attractor dynamics in difficult-to-treat rheumatic disease: a multi-axis ODE framework with cross-disease transcriptomic consistency analysis. npj Systems Biology and Applications (under review, 2026).</p> |
| title | ssj-ode3aif/3aif-ode-model: v7.7.0 — npj SBA revision (Eq. 1-6 implementation) |
| url | https://doi.org/10.5281/zenodo.20406029 |